CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACTN (Xylose isomerase OS=Bacteroides thetaiotaomicron GN=xylA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.083e-33 Identity = 74/139 (53.24%), Postives = 91/139 (65.47%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+IDAN GD Q GWDTDQF D E T M+ +I+NGGL GG NFDAK RR STD+ED+FIAHI GMD +AR L +AA L+++ +++ RY SFD G++ E GK E + A GEPK S KQEL E I Sbjct: 295 GSIDANRGDYQNGWDTDQFPIDNYELTQAMMQIIRNGGLGTGGTNFDAKTRRNSTDLEDIFIAHIAGMDAMARALESAAALLDESPYKKMLADRYASFDGGKGKEFEDGKLTLEDVVAYAKTKGEPKQTSGKQELYEAI 433
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ANATD (Xylose isomerase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=xylA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.553e-33 Identity = 72/139 (51.80%), Postives = 95/139 (68.35%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+IDAN GD +GWDTDQF TD+ TL M VIK GG GG NFDAK+RR S ++EDL I HI GMD A+G + A KL++DG + + +RY+S+ IG KI +G+A+F+MLE+ A+ + + S KQEL EMI Sbjct: 292 GSIDANMGDLLLGWDTDQFPTDVRLTTLAMYEVIKAGGFDKGGLNFDAKVRRGSFELEDLVIGHIAGMDAFAKGFKIAYKLVKDGVFDKFIDERYKSYKEGIGAKIVSGEANFKMLEEYALSLDKIENKSGKQELLEMI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_THETU (Xylose isomerase OS=Thermoanaerobacter thermosulfurogenes GN=xylA PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.641e-33 Identity = 73/139 (52.52%), Postives = 90/139 (64.75%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+IDANTGD +GWDTDQF TDI TL M VIK GG GG NFDAK+RR S + EDLF+ HI GMD A+G + A KL++D + + +RY S+ IG I +GKADF LEK A+E + S +QEL E I Sbjct: 293 GSIDANTGDMLLGWDTDQFPTDIRMTTLAMYEVIKMGGFDKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKDRVFDKFIEERYASYKDGIGADIVSGKADFRSLEKYALERSQIVNKSGRQELLESI 431
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACST (Xylose isomerase OS=Bacillus stearothermophilus GN=xylA PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.061e-33 Identity = 73/150 (48.67%), Postives = 99/150 (66.00%), Query Frame = -3 Query: 258 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQE-LAEMIFQSAI*IAAA 704 G++DAN GD +GWDTD+F TD+ TL M ++KNGGL GG NFDAK+RR S + EDLF AHI GMD+ A GL+ A +LIED E + +RY+S+ IG++I G ADF LE A++ GE + S +QE L ++ Q + + AA Sbjct: 291 GSVDANQGDMLLGWDTDEFPTDLYSTTLAMYEILKNGGLGRGGLNFDAKVRRGSFEPEDLFYAHIAGMDSFAVGLKVAHRLIEDRVFDEFIEERYKSYTEGIGREIVEGTADFHKLEAHALQLGEIQNQSGRQERLKTLLNQYLLEVCAA 440
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACSK (Xylose isomerase OS=Bacillus clausii (strain KSM-K16) GN=xylA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33 Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G++DAN GDP +GWDTD+F TD+ TL M +++NGGL GG NFDAK+RR S + +DLF AHI GMD+ A GL+ A +LI+D L + V RYQS+ IG++I G DF LE A+ GE K S + E + I Sbjct: 291 GSVDANQGDPLLGWDTDEFPTDLYSTTLAMYEILQNGGLGRGGLNFDAKVRRGSFEADDLFFAHIAGMDSFAIGLKVAQQLIDDRVLEQFVDSRYQSYKEGIGREIVLGNTDFHQLEAHALSLGEIKTRSGRVERIKAI 429
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RUMFL (Xylose isomerase OS=Ruminococcus flavefaciens GN=xylA PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32 Identity = 75/146 (51.37%), Postives = 94/146 (64.38%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGE--PKVPSAKQELAEMIFQSAI 704 G+IDAN GD +GWDTDQF T+I + T+ M VIK GG GG NFDAK RR S ED+F ++I GMD A G R A KLIEDG + + V RY S+++ IG I AGKADF LEK A+E GE + S +QE+ E I + + Sbjct: 290 GSIDANQGDVLLGWDTDQFPTNIYDTTMCMYEVIKAGGFTNGGLNFDAKARRGSFTPEDIFYSYIAGMDAFALGFRAALKLIEDGRIDKFVADRYASWNTGIGADIIAGKADFASLEKYALEKGEVTASLSSGRQEMLESIVNNVL 435
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_PECCP (Xylose isomerase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=xylA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32 Identity = 73/138 (52.90%), Postives = 92/138 (66.67%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GDPQ+GWDTDQF + E TLIM ++K GG GG NFDAK+RR+STD DLF AHI MDT+A L+ AA++IED L +LV KRY ++ E+GQ+I GKA E L A P+ S +QEL E Sbjct: 293 GSVDANRGDPQLGWDTDQFPNSVEENTLIMYEILKAGGFTTGGLNFDAKVRRQSTDRYDLFHAHIGAMDTMALALKAAARMIEDDKLNQLVAKRYAGWNGELGQQILQGKASLESLAHYAESHQLAPQHQSGQQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACSW (Xylose isomerase OS=Bacillus sp. (strain LW2) GN=xylA PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32 Identity = 72/150 (48.00%), Postives = 98/150 (65.33%), Query Frame = -3 Query: 258 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQE-LAEMIFQSAI*IAAA 704 G++DAN GD +GWDTD+F TD+ TL M ++KNGGL GG NFDAK+RR S + EDLF AHI GMD+ A GL+ A +LIED E + +RY+S+ IG++I G DF LE A++ GE + S +QE L ++ Q + + AA Sbjct: 291 GSVDANQGDMLLGWDTDEFPTDLYSTTLAMYEILKNGGLGRGGLNFDAKVRRGSFEPEDLFYAHIAGMDSFAVGLKVAHRLIEDRVFDEFIEERYKSYTEGIGREIVEGTVDFHKLEAHALQLGEIQNQSGRQERLKTLLNQYLLEVCAA 440
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ERWCT (Xylose isomerase OS=Erwinia carotovora subsp. atroseptica GN=xylA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 72/138 (52.17%), Postives = 92/138 (66.67%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GDPQ+GWDTDQF + E TLIM ++K GG GG NFDAK+RR+STD DLF AHI MDT+A L+ AA++IED L +LV KRY ++ E+GQ+I G A E L + A P+ S +QEL E Sbjct: 293 GSVDANRGDPQLGWDTDQFPNSVEENTLIMYEILKAGGFTTGGLNFDAKVRRQSTDRYDLFHAHIGAMDTMALALKAAARMIEDDKLNQLVAKRYAGWNGELGQQILQGNASLESLAQYAESHQLAPQHQSGQQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ACTPJ (Xylose isomerase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=xylA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 72/148 (48.65%), Postives = 99/148 (66.89%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFE----MLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G+IDAN GDPQ+GWDTDQF + E TL+M ++K GG GGFNFDAK+RR+STD DLF HI +D +A L+ AAK+IED +L +V +RY ++ ++GQ+I AGKA E ++E KA+ +PK S +QE E + + I Sbjct: 293 GSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKAGGFTTGGFNFDAKIRRQSTDPYDLFHGHIGAIDVLALSLKRAAKMIEDKTLQGIVDQRYAGWNGDLGQQILAGKASLEDLAKIVESKAL---DPKPVSGQQEYLENLVNNYI 437 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |