CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ACTP7 (Xylose isomerase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=xylA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 72/148 (48.65%), Postives = 99/148 (66.89%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFE----MLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G+IDAN GDPQ+GWDTDQF + E TL+M ++K GG GGFNFDAK+RR+STD DLF HI +D +A L+ AAK+IED +L +V +RY ++ ++GQ+I AGKA E ++E KA+ +PK S +QE E + + I Sbjct: 293 GSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKAGGFTTGGFNFDAKIRRQSTDPYDLFHGHIGAIDVLALSLKRAAKMIEDKTLQGIVDQRYAGWNGDLGQQILAGKASLEDLAKIVESKAL---DPKPVSGQQEYLENLVNNYI 437
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ACTP2 (Xylose isomerase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=xylA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 72/148 (48.65%), Postives = 99/148 (66.89%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFE----MLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G+IDAN GDPQ+GWDTDQF + E TL+M ++K GG GGFNFDAK+RR+STD DLF HI +D +A L+ AAK+IED +L +V +RY ++ ++GQ+I AGKA E ++E KA+ +PK S +QE E + + I Sbjct: 293 GSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKAGGFTTGGFNFDAKIRRQSTDPYDLFHGHIGAIDVLALSLKRAAKMIEDKTLQGIVDQRYAGWNGDLGQQILAGKASLEDLAKIVESKAL---DPKPVSGQQEYLENLVNNYI 437
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ENTFA (Xylose isomerase OS=Enterococcus faecalis GN=xylA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+IDAN GD +GWDTD+F T++ + TL M +++NGG+ PGG NFD+K+RR S ++EDL +AHI GMDT ARGL++A KL ED +L +RY SF IG KI +GK + E L A++ EP + S+ E + I Sbjct: 291 GSIDANQGDVLLGWDTDEFPTNVYDVTLAMYEILENGGIEPGGINFDSKVRRSSFEMEDLLLAHIAGMDTFARGLKSAMKLKEDRFFEDLKEQRYSSFKKGIGAKIISGKENLESLTNYALKNDEPIIESSHIEYVKNI 429
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_CLOTS (Xylose isomerase OS=Clostridium thermosaccharolyticum GN=xylA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 68/125 (54.40%), Postives = 84/125 (67.20%), Query Frame = -3 Query: 330 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGE 704 G+IDANTGD +GWDTDQF TDI TL M VIK GG GG NFDAK+RR S + EDLF+ HI GMD A+G + A KL++D + + +RY S+ IG I +GKADF+ LEK A+E E Sbjct: 293 GSIDANTGDMLLGWDTDQFPTDIRMTTLAMYEVIKMGGFDKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKDAEFDKFIEERYASYKDGIGADIVSGKADFKSLEKYALEHSE 417
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACFR (Xylose isomerase OS=Bacteroides fragilis GN=xylA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 72/139 (51.80%), Postives = 89/139 (64.03%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+IDAN GD Q GWDTDQF D E T M+ +I+N GL GG NFDAK RR STD ED+FIAHI GMD +AR L +AA L+ + +++ RY SFD+ G++ E GK E L A GEPK S +QEL E + Sbjct: 295 GSIDANRGDYQNGWDTDQFPIDNFELTQAMMQIIRNDGLGNGGTNFDAKTRRNSTDPEDIFIAHIAGMDAMARALESAANLLNESPYQKMLSDRYASFDAGKGKEFEEGKLSLEELVAYAKANGEPKQTSGQQELYEAL 433
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACFN (Xylose isomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=xylA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 72/139 (51.80%), Postives = 89/139 (64.03%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+IDAN GD Q GWDTDQF D E T M+ +I+N GL GG NFDAK RR STD ED+FIAHI GMD +AR L +AA L+ + +++ RY SFD+ G++ E GK E L A GEPK S +QEL E + Sbjct: 295 GSIDANRGDYQNGWDTDQFPIDNFELTQAMMQIIRNDGLGNGGTNFDAKTRRNSTDPEDIFIAHIAGMDAMARALESAANLLNESPYQKMLSDRYASFDAGKGKEFEEGKLSLEELVAYAKANGEPKQTSGQQELYEAL 433
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_THEPX (Xylose isomerase OS=Thermoanaerobacter sp. (strain X514) GN=xylA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.701e-32 Identity = 70/139 (50.36%), Postives = 92/139 (66.19%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+IDAN GD +GWDTDQ+ TDI TL M VIK GG GG NFDAK+RR S + EDLF+ HI GMD A+G + A KL++DG + +RY+S+ IG +I +GKA+F+ LE+ A+ + + S KQEL E I Sbjct: 292 GSIDANMGDMLLGWDTDQYPTDIRMTTLAMYEVIKMGGFNKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKDGVFDRFIEERYKSYREGIGAEIVSGKANFKTLEEYALNNPKIENKSGKQELLESI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_THEP3 (Xylose isomerase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=xylA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.701e-32 Identity = 70/139 (50.36%), Postives = 92/139 (66.19%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+IDAN GD +GWDTDQ+ TDI TL M VIK GG GG NFDAK+RR S + EDLF+ HI GMD A+G + A KL++DG + +RY+S+ IG +I +GKA+F+ LE+ A+ + + S KQEL E I Sbjct: 292 GSIDANMGDMLLGWDTDQYPTDIRMTTLAMYEVIKMGGFNKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKDGVFDRFIEERYKSYREGIGAEIVSGKANFKTLEEYALNNPKIENKSGKQELLESI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_THEYO (Xylose isomerase OS=Thermoanaerobacter yonseii GN=xylA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.493e-31 Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+IDAN D +GWDTDQF TDI TL M VIK GG GG NFDAK+RR S + EDLFIAHI GMD A+G + A +L++DG + + +RY+S+ IG +I +G+A+F+ LE+ A+ + + S KQEL E I Sbjct: 292 GSIDANMRDMLLGWDTDQFPTDIRMTTLAMYEVIKMGGFDKGGLNFDAKVRRASFEPEDLFIAHIAGMDAFAKGFKVAYRLVKDGVFDKFIEERYKSYKEGIGAEIVSGRANFKTLEEYALNNPKIENKSGKQELLESI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_OCEIH (Xylose isomerase OS=Oceanobacillus iheyensis GN=xylA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31 Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = -3 Query: 300 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQEL 704 G++DAN G P +GWDTD+F +DI TL M ++KN GL GG NFDAK+RR S EDLF AHI GMD+ A GL+ A +L++D L +V RY+SF+ IG+ I +GK DF LEK A+ E PS + E+ Sbjct: 291 GSVDANQGHPLLGWDTDEFPSDIYTTTLAMYEILKNDGLGKGGLNFDAKVRRGSFTAEDLFHAHIAGMDSFAIGLKVAQRLMDDRVLENVVEDRYRSFNQGIGRDIVSGKTDFHQLEKHALTLSEITQPSGQLEV 425 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |