CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SERP5 (Xylose isomerase OS=Serratia proteamaculans (strain 568) GN=xylA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.816e-30 Identity = 67/138 (48.55%), Postives = 88/138 (63.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GDPQ+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AAK++ DG L + V KRY ++ E+GQ+I GK E L + A P+ S +QE E Sbjct: 293 GSVDANRGDPQLGWDTDQFPISVEENALVMFEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKVAAKMVTDGQLHQQVSKRYAGWNGELGQQILQGKLSLEALAQYAEGHALAPQHVSGRQEQLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_MANSM (Xylose isomerase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=xylA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.677e-30 Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G+IDAN GDPQ+GWDTDQF + E TL + ++K GGL GGFNFDAK+RR+S + DLF HI +D +A L+ AAK++ED +L +V +RY ++ E+GQ+I AGK+ E L + A +P S +QE E + I Sbjct: 293 GSIDANRGDPQLGWDTDQFPNSVEENTLAIYEILKAGGLTTGGFNFDAKIRRQSINPYDLFHGHIGAIDVLALSLKRAAKMVEDHTLQNIVDQRYAGWNGELGQQILAGKSSLEALAQAAQNL-DPNPVSGQQEYIENLVNGYI 435
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ESCF3 (Xylose isomerase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=xylA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.677e-30 Identity = 67/140 (47.86%), Postives = 89/140 (63.57%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMI 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA++IEDG L + V +RY ++SE+GQ+I G+ L K A + P S QEL E + Sbjct: 293 GSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKVAARMIEDGELDKRVAQRYSGWNSELGQQILKGQMSLSDLAKYAQDHNLSPVHQSGHQELLESL 432
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACHD (Xylose isomerase OS=Bacillus halodurans GN=xylA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = -3 Query: 303 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQE 704 G++DAN GD +GWDTD+F TD+ TL M ++KN GL GG NFDAK+RR S + DLF AHI GMD+ A GL+ A +L+ED L +++ RY+S+ S IGQKI + + LE A+ GE K S +QE Sbjct: 291 GSVDANQGDTLLGWDTDEFPTDLYTTTLAMYEILKNDGLGKGGLNFDAKVRRGSFEANDLFHAHIAGMDSFAIGLKVANQLLEDRVLEDVIDNRYKSYQSGIGQKIANNDTNLKELEAYALSLGEIKHSSGQQE 424
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_XANC5 (Xylose isomerase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=xylA1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30 Identity = 71/137 (51.82%), Postives = 86/137 (62.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAE 704 G+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ L + +RY SFDS G AGK L K A P+ S +QE E Sbjct: 301 GSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALLTASPLEQWRAERYASFDSGAGADFAAGKTTLADLAKHAAS-NAPQQLSGRQEAYE 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_LACPE (Xylose isomerase OS=Lactobacillus pentosus GN=xylA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30 Identity = 65/123 (52.85%), Postives = 84/123 (68.29%), Query Frame = -3 Query: 339 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAP-GGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAME 704 G++DAN GD +GWD D+F +D+ EAT M V++NG + P GG NFDAK RR S DLF HIVG+DT A GLR A K+ +DG L +LV RY S+ S +G +IEAG ADF+ LE A++ Sbjct: 295 GSLDANQGDKLIGWDIDEFPSDLYEATAAMYEVVENGSIGPRGGLNFDAKPRRSSFAANDLFYGHIVGIDTFAAGLRVALKMKQDGFLEKLVADRYSSYQSGVGAEIEAGTADFKSLESYAID 417
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BURPP (Xylose isomerase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=xylA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30 Identity = 67/145 (46.21%), Postives = 89/145 (61.38%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G++DAN GDPQ GWDTDQF + E TL ++K+GG GG NFD+K+RR+S D EDLF HI +D +A + AA LIE+ L + R+RY +D+E G+KI +G L ++AM G P+ S QEL E I AI Sbjct: 292 GSVDANRGDPQNGWDTDQFPNSVEELTLAFYEILKHGGFTTGGMNFDSKVRRQSVDPEDLFYGHIGAIDNLALAVERAAVLIENDRLDQFKRQRYSGWDAEFGRKISSGDYSLSALAEEAMARGLNPQHASGHQELMENIVNQAI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SHISS (Xylose isomerase OS=Shigella sonnei (strain Ss046) GN=xylA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA++IEDG L + + +RY ++SE+GQ+I G+ L K A E P S +QE E Sbjct: 293 GSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHNLSPVHQSGRQEQLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SHIB3 (Xylose isomerase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=xylA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA++IEDG L + + +RY ++SE+GQ+I G+ L K A E P S +QE E Sbjct: 293 GSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHNLSPVHQSGRQEQLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ECOSM (Xylose isomerase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=xylA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA++IEDG L + + +RY ++SE+GQ+I G+ L K A E P S +QE E Sbjct: 293 GSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHNLSPVHQSGRQEQLE 430 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |