CF832747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.308e-25 Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = -3 Query: 231 LQKDPPTSCSAGPVAEDMFHWQATIMGPP-DSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 635 L +P A P + ++ I G DSP+ GG F + +YP PKV F TK++HPN++ I LDILK++WSPAL I VLLSI +LL PNPDDPL ++ +K+++A+ TAR+WT+ YAM Sbjct: 15 LLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQAIETARAWTRLYAM 150
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.015e-25 Identity = 55/135 (40.74%), Postives = 84/135 (62.22%), Query Frame = -3 Query: 234 DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 626 +PP + + + +A I+G ++PY GVF + + P YPF+PP+V F T ++HPNI+S+G ICLDIL K W P+L I+ VL SI L+ +PNPDDPL+ +I+ +K +K + A+ WT+ +A Sbjct: 17 EPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTEAHA 151
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.015e-25 Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = -3 Query: 234 ATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 569 A I GP D+ YA G+F + I P YPF+PP V+F T ++HPNI+++G ICLDIL K W P+L IS VL S+ LL++PNPDD L+ E++ YK ++ ++ AR T+KYA Sbjct: 49 AQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 8.772e-25 Identity = 56/127 (44.09%), Postives = 80/127 (62.99%), Query Frame = -3 Query: 228 PVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS-DKAKYEATARSWTQKYAMG 599 PV + DMFHW+A I GP ++PY GG +++ IH YP PP V F+TK+ HPNI+ +NG +C+DILK WSPA ++ L+I SLL++ + PL + A + ++ DK Y + R T YA G Sbjct: 28 PVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 8.772e-25 Identity = 51/136 (37.50%), Postives = 82/136 (60.29%), Query Frame = -3 Query: 279 LKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 644 L +L K+P SAG + + D++ W+ I+GPPD+ Y GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ D+ Sbjct: 14 LAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 8.772e-25 Identity = 51/136 (37.50%), Postives = 82/136 (60.29%), Query Frame = -3 Query: 279 LKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 644 L +L K+P SAG + + D++ W+ I+GPPD+ Y GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ D+ Sbjct: 14 LAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 8.772e-25 Identity = 51/136 (37.50%), Postives = 82/136 (60.29%), Query Frame = -3 Query: 279 LKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 644 L +L K+P SAG + + D++ W+ I+GPPD+ Y GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ D+ Sbjct: 14 LAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.496e-24 Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = -3 Query: 237 DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKY 587 ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.496e-24 Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = -3 Query: 237 DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKY 587 ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.496e-24 Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = -3 Query: 237 DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKY 587 ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147 The following BLAST results are available for this feature:
BLAST of CF832747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832747 ID=CF832747; Name=CF832747; organism=Citrus sinensis; type=EST; length=646bpback to top |