CF832747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.981e-20 Identity = 50/143 (34.97%), Postives = 78/143 (54.55%), Query Frame = -3 Query: 234 KDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 641 K +KD P A P ++ + + I G +P+ GG+F + + F DYP PPK F +FHPN+ +G++CL IL+E W PA+TI ++LL I LL +PN DP E ++ D+ +YE R+ +K++ Sbjct: 14 KAWRKDHPLGLVAVPTKNPDGTMNLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRVRAQAKKFS 156
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.981e-20 Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = -3 Query: 255 KDLQK-DPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATAR 641 KD+ + + PT C+ D+ ++ +I P D Y F TI+ P YP+ PPKV T V+HPNI+ G +CL+IL++ W P L I V+ + +L +PNPDDPL + A + +K +EA R Sbjct: 84 KDIDEMEVPTGCAVSFKDTNDILNFNLSIT-PTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVR 213
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20 Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 276 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKA 608 SA P ++++F W TI G + Y + +++ FP YP+ P V F T +HPN+++ G+ICLDILKE+WS + +LLSI SLL +PN D PL A ++K+ A Sbjct: 51 SAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20 Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = -3 Query: 234 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 638 DL K + + + M + GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL E A + D+ YE + + +KYA Sbjct: 11 DLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYA 147
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20 Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = -3 Query: 234 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 638 D+ K + + + M + GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL E A + D+ YE + + +KYA Sbjct: 11 DMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYA 147
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.110e-19 Identity = 45/111 (40.54%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 276 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKA 608 SA P ++++F W TI G + Y + +++ FP YP+ P V F T FHPN++S+G+ICLDILK++WS + +LLS+ SLL +PN + PL P A ++++ A Sbjct: 51 SAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTA 161
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.110e-19 Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = -3 Query: 234 VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 596 + + M + +GP D+PY GV+ + + P +YP+K P + F K+FHPNI+ ++GSICLD++ WSP + ++ I LL +PN DPL E A + DK YE + + KYA Sbjct: 25 INDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYA 147
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.449e-19 Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 276 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKA 608 SA P ++++F W TI G + Y + +++ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K+ A Sbjct: 51 SAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.449e-19 Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 276 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKA 608 SA P ++++F W TI G + Y + +++ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K+ A Sbjct: 51 SAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.449e-19 Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 276 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKA 608 SA P ++++F W TI G + Y + +++ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K+ A Sbjct: 51 SAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161 The following BLAST results are available for this feature:
BLAST of CF832747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832747 ID=CF832747; Name=CF832747; organism=Citrus sinensis; type=EST; length=646bpback to top |