CF832747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2U_MACFA (Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.959e-16 Identity = 46/139 (33.09%), Postives = 80/139 (57.55%), Query Frame = -3 Query: 231 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDIL--KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 638 DL+++ +A PV+EDM W+ I G +S + G VF +TIHF +Y + PP V F T FHPN++ + G C+D L ++W+ T+S +LL++ +L++P ++P+ E A + D++ Y + + + M Sbjct: 15 DLKENNYKGITARPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILTKDESLYRTILKLFNRPLQM 153
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2F_XENTR (NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.699e-16 Identity = 48/142 (33.80%), Postives = 70/142 (49.30%), Query Frame = -3 Query: 234 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 638 +L+ + P +C + H+ + P +S Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK +Y + ++YA Sbjct: 43 ELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYA 184
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.699e-16 Identity = 48/142 (33.80%), Postives = 70/142 (49.30%), Query Frame = -3 Query: 234 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 638 +L+ + P +C + H+ + P +S Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK +Y + ++YA Sbjct: 43 ELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYA 184
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UB2L6_BOVIN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Bos taurus GN=UBE2L6 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.699e-16 Identity = 45/143 (31.47%), Postives = 78/143 (54.55%), Query Frame = -3 Query: 231 LKDLQKDPP----TSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 644 L+DLQK+ P CS +++ W A ++ P PY F + I FP +YPF+PP V F T+++HPN++ +G +CL I+ K+ W + +VL ++ L+ P P P+ E+A D ++ A+ +T ++ + Sbjct: 11 LEDLQKELPKYLRNLCSE---EDNVLVWHALLL-PERPPYNLKAFRLCISFPREYPFQPPTVKFTTRIYHPNVDRDGRVCLPIISKKNWKASTRTCQVLEALNMLVNQPEPGQPVRLELAEQLTQDPELFDQMAQEFTLQFGV 149
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC4_MIMIV (Probable bifunctional E2/E3 enzyme R795 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R795 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.443e-16 Identity = 41/120 (34.17%), Postives = 63/120 (52.50%), Query Frame = -3 Query: 231 EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 590 +D+ W+ GP +PY G +L I F +YP P + F T + H NIN+ G +C IL ++P + IS +L I LL +P+ +DPL +A +Y YEA + K+A+ Sbjct: 1160 QDISFWKIVFKGPDSTPYKNGTWLAYIQFTEEYPNIAPNIRFVTPIKHCNINNYGRVCHSILDRNYTPNVKISLILQCIYGLLLNPDVNDPLDTNLAMIYYDANGLYEAQIIDYVNKFAL 1279
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.721e-16 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = -3 Query: 267 DMFHWQATIMG-PPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 587 ++F W +M DS Y GG F + FP D+PF PP+ F ++HPN+ +G +C+ IL E WSP T+ VL+SI SLL DPN + P + A Y+ + +Y+ Sbjct: 38 NIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYK 157
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.166e-15 Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = -3 Query: 255 IMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATAR 563 I+ P + Y G + F YP +PPKV K+FHPNI+ G++CL+IL+E WSPAL + ++ + L +PNP+DPL + A + + ++ R Sbjct: 67 IVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVR 169
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.694e-15 Identity = 38/116 (32.76%), Postives = 63/116 (54.31%), Query Frame = -3 Query: 252 PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARS 599 P+ ++ H + + P + Y GG F I +YP PPKV K++HPNI+ G++CL+IL++ W+P L ++ +L+ + L PN +DPL E A D + + R+ Sbjct: 48 PIKLNVLHLE---IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVRT 160
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2F_CHICK (NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.825e-15 Identity = 48/143 (33.57%), Postives = 72/143 (50.35%), Query Frame = -3 Query: 234 DLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 638 +L+ + P +C P + ++Q T++ P + Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + ++YA Sbjct: 43 ELEANLPCTCKVNFPDPNKLHYFQLTVI-PDEGYYQGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYA 184
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.825e-15 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = -3 Query: 339 LKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAF-RTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 644 L + Q +PPT V +++ W ++G P + YA + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+ Sbjct: 24 LVEWQMNPPTGFKH-KVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125 The following BLAST results are available for this feature:
BLAST of CF832747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832747 ID=CF832747; Name=CF832747; organism=Citrus sinensis; type=EST; length=646bpback to top |