CF832747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC12_ASHGO (NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii GN=UBC12 PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.301e-15 Identity = 35/103 (33.98%), Postives = 58/103 (56.31%), Query Frame = -3 Query: 252 MGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARS 560 + P + Y GG F ++ F YP +PP V ++HPNI+ +G+ICL++L+E WSP + + V+L + L +PN DPL + A D ++E ++ Sbjct: 65 ISPEEGVYRGGHFRFSVVFRDTYPIEPPTVKCLNTIYHPNIDYSGNICLNVLREDWSPVMDLQTVVLGLLFLFLEPNGSDPLNRQAADTMLRDPYRFETNVQA 167
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UB2L6_MOUSE (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Mus musculus GN=Ube2l6 PE=2 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 6.301e-15 Identity = 43/140 (30.71%), Postives = 73/140 (52.14%), Query Frame = -3 Query: 231 LKDLQKD-PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 644 L+ L K+ PP ++ W ++ P PY F V I FP +YPFKPP + F TK++HPN+ +G +CL ++ E W P +VL ++ L++ PN ++P+ E+A + + + A +T K+ + Sbjct: 11 LESLSKELPPYLRQLSSDDANVLVWHMLLL-PDQLPYGLKAFQVRIDFPREYPFKPPTLRFTTKIYHPNVREDGLVCLPLISNENWKPYTKPYQVLEALNVLVSKPNLEEPVRLELADLLTQNPEMFRKKAEEFTLKFGV 149
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UB2L6_RAT (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Rattus norvegicus GN=Ube2l6 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.230e-15 Identity = 44/140 (31.43%), Postives = 73/140 (52.14%), Query Frame = -3 Query: 231 LKDLQKD-PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 644 L DL K+ PP ++ W ++ P PY F + I FP +YP KPP + F TK++HPNI+ +G +CL ++ E W P +VL ++ L++ PN ++P+ E+A + D + A +T +Y + Sbjct: 11 LDDLSKELPPYLRHLSSDDANVLVWHMLLL-PDQLPYRLKAFGLRIDFPREYPLKPPTLRFTTKIYHPNISEDGLVCLPLISTENWKPYTKAYQVLEALNILVSRPNLEEPVRLELADLLTQDPEMFRKKAEEFTLQYGV 149
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC6_SCHPO (Ubiquitin-conjugating enzyme E2 6 OS=Schizosaccharomyces pombe GN=ubc6 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.075e-14 Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = -3 Query: 339 LQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 635 LQK+P A P E++ W I GPPD+PY GG + T+ FPPDYPFKPP + T +N +CL D + W+P+ +S +L+ + S +T Sbjct: 17 LQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFMT 116
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.075e-14 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 339 LKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 644 L + Q +PPT V +++ W + G P + YA + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 24 LSEWQVNPPTGFKHR-VTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.075e-14 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = -3 Query: 339 LKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 644 L + Q +PPT V +++ W + G P + YA + + + FP YP + P+V F + HP+I SNG ICLDIL + WSPA+T++ V +SI S+L+ Sbjct: 24 LSEWQLNPPTGFRH-KVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS 125
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: U2D2L_HUMAN (Putative ubiquitin-conjugating enzyme E2 D2-like protein OS=Homo sapiens GN=UBE2DNL PE=5 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.075e-14 Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = -3 Query: 447 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFH 638 +L +DP CSAGPV +DM HWQATI P DS Y GGVF + FP DY FKPPK+ F ++H Sbjct: 12 ELARDPQPHCSAGPVWDDMLHWQATITRPNDSSYLGGVFF--LKFPSDYLFKPPKIKFTNGIYH 73
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.404e-14 Identity = 33/91 (36.26%), Postives = 54/91 (59.34%), Query Frame = -3 Query: 267 YAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 539 YAGG + + YP +PP V +++HPNI+ +G++CL++L+E W+PAL I +++ I L +PN DPL + A D ++E Sbjct: 72 YAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAKTLIEDPLRFE 162
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBCX_YEAST (Ubiquitin-conjugating enzyme E2-21 kDa OS=Saccharomyces cerevisiae GN=PEX4 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.394e-14 Identity = 48/142 (33.80%), Postives = 74/142 (52.11%), Query Frame = -3 Query: 255 LKDLQKDPPTSC-------SAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAF-RTKVFHPNINS-NGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-SDKAKYEATAR 644 LK L D P + S P+ E D+ W+A I GP D+PY F + I P YP PPK++F + + H N+ S G ICL+ILK E+W+P + + ++ LL +P D PL +I ++ + D + Y+ + Sbjct: 30 LKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVK 171
BLAST of CF832747 vs. ExPASy Swiss-Prot
Match: UBE2F_DANRE (NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.127e-14 Identity = 48/143 (33.57%), Postives = 71/143 (49.65%), Query Frame = -3 Query: 234 DLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 638 +L+ + P++C P + H+Q I P + Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL + A + DK + + + + YA Sbjct: 43 ELEANLPSTCKVTFPDENKLCHFQLAI-SPDEGYYLGGKFQFEIEVPEAYNMVPPKVKCLTRIWHPNIAETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIDAAEHHLRDKEDFRNKVQDFIKNYA 184 The following BLAST results are available for this feature:
BLAST of CF832747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832747 ID=CF832747; Name=CF832747; organism=Citrus sinensis; type=EST; length=646bpback to top |