CF832749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BL1_PSAMI (Late histone H2B.2.1 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.217e-30 Identity = 64/78 (82.05%), Postives = 73/78 (93.59%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISSKAM IMNSF+ND+FE++A EASRLA YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 46 QVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 123
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B1A_RAT (Histone H2B type 1-A OS=Rattus norvegicus GN=Hist1h2ba PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.217e-30 Identity = 66/78 (84.62%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISSKAM IMNSF+ DIFE++A EASRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 49 QVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 126
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BL4_STRPU (Late histone H2B.L4 (Fragment) OS=Strongylocentrotus purpuratus PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.075e-30 Identity = 63/78 (80.77%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISS+AM IMNSF+ND+FE++A EASRLA+YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 29 QVHPDTGISSRAMSIMNSFVNDVFERIAGEASRLAQYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 106
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BL2_PSAMI (Late histone H2B.2.2 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 2.075e-30 Identity = 63/78 (80.77%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISSKAM IMNSF+ND+FE++A EASRL++YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 46 QVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLSQYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 123
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BL1_STRPU (Late histone H2B.L1 OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 2.075e-30 Identity = 63/78 (80.77%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISS+AM IMNSF+ND+FE++A EASRLA YNKK TITSRE+QT VRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 45 QVHPDTGISSRAMSIMNSFVNDVFERIAAEASRLAHYNKKSTITSREVQTVVRLLLPGELAKHAVSEGTKAVTKYTTS 122
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_OLILU (Histone H2B OS=Olisthodiscus luteus PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 2.710e-30 Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GIS + M IMNSFINDIFE+LA EASRLARYNK+ T++SREIQTAVRL+LPGELAKHAVSEGTKAVTKFTS+ Sbjct: 37 QVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BE_STRPU (Histone H2B, embryonic OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 3.540e-30 Identity = 64/78 (82.05%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISS+AM IMNSF+NDIFE++A E+SRLA+YNKK TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 46 QVHPDTGISSRAMVIMNSFVNDIFERIAGESSRLAQYNKKSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTTS 123
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BE2_PSAMI (Histone H2B.2, embryonic OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 4.623e-30 Identity = 64/78 (82.05%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISS+AM IMNSF+NDIFE++A E+SRLA+YNKK TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 45 QVHPDTGISSRAMIIMNSFVNDIFERIAGESSRLAQYNKKSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTTS 122
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B1A_HUMAN (Histone H2B type 1-A OS=Homo sapiens GN=HIST1H2BA PE=1 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 7.885e-30 Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISSKAM IMNSF+ DIFE++A EASRLA Y+K+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 49 QVHPDTGISSKAMSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 126
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_EUPCR (Histone H2B OS=Euplotes crassus GN=H2B1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.345e-29 Identity = 62/78 (79.49%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHP+ G+S K+M IMNSFINDIFEK+A EAS+L RYNKK T++SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 QVHPETGVSKKSMSIMNSFINDIFEKIALEASKLVRYNKKHTLSSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 113 The following BLAST results are available for this feature:
BLAST of CF832749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832749 ID=CF832749; Name=CF832749; organism=Citrus sinensis; type=EST; length=474bpback to top |