CF832749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B6_WHEAT (Histone H2B.6 OS=Triticum aestivum GN=TH123 PE=1 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 8.718e-29 Identity = 62/76 (81.58%), Postives = 71/76 (93.42%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFT 228 Q+ P++GISSK+M I+NS INDIFEKLA E+++LARYNKKPTITSREIQTAVRLV PGELAKHAVSEGTKAVT+FT Sbjct: 44 QIDPNMGISSKSMSIINSIINDIFEKLAGESAKLARYNKKPTITSREIQTAVRLVFPGELAKHAVSEGTKAVTRFT 119
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B2_PICST (Histone H2B.2 OS=Pichia stipitis GN=HTB2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 8.718e-29 Identity = 60/78 (76.92%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 Q HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 52 QTHPDTGISQKAMSIMNSFVNDIFERIASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 129
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B2_CANAL (Histone H2B.2 OS=Candida albicans GN=HTB2 PE=3 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 8.718e-29 Identity = 60/78 (76.92%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 Q HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 51 QTHPDTGISQKAMSIMNSFVNDIFERIASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 128
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_LODEL (Histone H2B OS=Lodderomyces elongisporus GN=HTB1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.139e-28 Identity = 59/78 (75.64%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 Q HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++RE+QTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 52 QTHPDTGISQKAMSIMNSFVNDIFERIASEASKLAAYNKKSTISAREVQTAVRLILPGELAKHAVSEGTRAVTKYSSA 129
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B1_CANAL (Histone H2B.1 OS=Candida albicans GN=HTB1 PE=3 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 1.139e-28 Identity = 60/78 (76.92%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 Q HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 51 QTHPDTGISQKAMSIMNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 128
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B2_DEBHA (Histone H2B.2 OS=Debaryomyces hansenii GN=HTB2 PE=3 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 1.487e-28 Identity = 60/78 (76.92%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 Q HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 50 QTHPDTGISQKAMSIMNSFVNDIFERIAGEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 127
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B1_SCHPO (Histone H2B-alpha OS=Schizosaccharomyces pombe GN=htb1 PE=1 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 1.487e-28 Identity = 60/78 (76.92%), Postives = 73/78 (93.59%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQTAVRL+LPGELAKHAV+EGTK+VTK++SS Sbjct: 47 QVHPDTGISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSREIQTAVRLILPGELAKHAVTEGTKSVTKYSSS 124
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B1_DEBHA (Histone H2B.1 OS=Debaryomyces hansenii GN=HTB1 PE=3 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 1.487e-28 Identity = 60/78 (76.92%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 Q HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 51 QTHPDTGISQKAMSIMNSFVNDIFERIAGEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 128
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_AGABI (Histone H2B OS=Agaricus bisporus GN=htbA PE=2 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 1.942e-28 Identity = 59/77 (76.62%), Postives = 72/77 (93.51%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 231 QVHPD GIS+KAM I+NSF+NDIFE++A EAS+LA Y+KK TI+SREIQT+VRL+LPGELAKHA+SEGTK+VTKF+S Sbjct: 64 QVHPDTGISNKAMAILNSFVNDIFERIATEASKLASYSKKSTISSREIQTSVRLILPGELAKHAISEGTKSVTKFSS 140
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BS1_PSAMI (Histone H2B.1, sperm OS=Psammechinus miliaris PE=1 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 1.942e-28 Identity = 57/78 (73.08%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISS+AM +MNSF+ND+FE++A EA RL YN++ T++SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 59 QVHPDTGISSRAMSVMNSFVNDVFERIASEAGRLTTYNRRNTVSSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 136 The following BLAST results are available for this feature:
BLAST of CF832749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832749 ID=CF832749; Name=CF832749; organism=Citrus sinensis; type=EST; length=474bpback to top |