CF832749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_TETPY (Histone H2B OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 7.380e-28 Identity = 57/78 (73.08%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD+GIS KAM IMNSFIND FE++A E+S+L R+NK+ T++SRE+QTAV+L+LPGELA+HA+SEGTKAVTKF+SS Sbjct: 42 QVHPDVGISKKAMNIMNSFINDSFERIALESSKLVRFNKRRTLSSREVQTAVKLLLPGELARHAISEGTKAVTKFSSS 119
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BS2_PARAN (Histone H2B.2, sperm OS=Parechinus angulosus PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 7.380e-28 Identity = 58/78 (74.36%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISS+AM +MNSF+ND+FE++A EASRL N++ T++SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 66 QVHPDTGISSRAMSVMNSFVNDVFERIAGEASRLTSANRRSTVSSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 143
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B2_TETTH (Histone H2B.2 OS=Tetrahymena thermophila GN=HTB2 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 7.380e-28 Identity = 57/78 (73.08%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD+GIS KAM IMNSFIND FE++A E+S+L R+NK+ T++SRE+QTAV+L+LPGELA+HA+SEGTKAVTKF+SS Sbjct: 43 QVHPDVGISKKAMNIMNSFINDSFERIALESSKLVRFNKRRTLSSREVQTAVKLLLPGELARHAISEGTKAVTKFSSS 120
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B1_TETTH (Histone H2B.1 OS=Tetrahymena thermophila GN=HTB1 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 7.380e-28 Identity = 57/78 (73.08%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD+GIS KAM IMNSFIND FE++A E+S+L R+NK+ T++SRE+QTAV+L+LPGELA+HA+SEGTKAVTKF+SS Sbjct: 43 QVHPDVGISKKAMNIMNSFINDSFERIALESSKLVRFNKRRTLSSREVQTAVKLLLPGELARHAISEGTKAVTKFSSS 120
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BS2_LYTPI (Histone H2B.2, sperm OS=Lytechinus pictus PE=2 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 1.259e-27 Identity = 58/78 (74.36%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISS+ M +MNSF+ND+FE++A EASRL + N++ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 65 QVHPDTGISSRGMSVMNSFVNDVFERIAGEASRLCQANRRRTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 142
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_CRYNE (Histone H2B OS=Cryptococcus neoformans GN=HTB1 PE=3 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 1.644e-27 Identity = 57/78 (73.08%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GIS+KAM I+NSF++DIFE++A EAS+LA YN + TI+SREIQT+VRL+LPGEL+KHA+SEGTKAVTK++SS Sbjct: 61 QVHPDTGISNKAMAILNSFVSDIFERIATEASKLASYNHRSTISSREIQTSVRLILPGELSKHAISEGTKAVTKYSSS 138
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BS2_STRPU (Histone H2B.2, sperm OS=Strongylocentrotus purpuratus PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 1.644e-27 Identity = 59/78 (75.64%), Postives = 70/78 (89.74%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GISS+ M +MNSF+NDIF ++A EASRL R N++ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 66 QVHPDTGISSRGMSVMNSFVNDIFGRIAGEASRLTRANRRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 143
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B2_PICGU (Histone H2B.2 OS=Pichia guilliermondii GN=HTB2 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.147e-27 Identity = 57/78 (73.08%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 Q HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSE T+ +TK++S+ Sbjct: 50 QTHPDTGISQKAMSIMNSFVNDIFERVASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEATRTITKYSSA 127
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B1_PICGU (Histone H2B.1 OS=Pichia guilliermondii GN=HTB1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.147e-27 Identity = 57/78 (73.08%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 Q HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSE T+ +TK++S+ Sbjct: 50 QTHPDTGISQKAMSIMNSFVNDIFERVASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEATRTITKYSSA 127
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BS2_PSAMI (Histone H2B.2, sperm OS=Psammechinus miliaris PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 2.805e-27 Identity = 58/80 (72.50%), Postives = 71/80 (88.75%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*R 240 QVHPD GISS+ M +MNSF+ND+FE++A EASRL N++ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T++ R Sbjct: 64 QVHPDTGISSRGMSVMNSFVNDVFERIAGEASRLTSANRRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTARR 143 The following BLAST results are available for this feature:
BLAST of CF832749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832749 ID=CF832749; Name=CF832749; organism=Citrus sinensis; type=EST; length=474bpback to top |