CF832749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_YARLI (Histone H2B OS=Yarrowia lipolytica GN=HTB1 PE=3 SV=3) HSP 1 Score: 117.087 bits (292), Expect = 4.050e-26 Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 231 Q HPD GIS++AM IMNSF+NDIFE++A EAS+LA Y KK TITSREIQTAVRL+LPGELAKHA +GT+AV K+++ Sbjct: 60 QTHPDTGISTRAMSIMNSFVNDIFERVATEASKLATYTKKSTITSREIQTAVRLILPGELAKHATGDGTRAVAKYST 136
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_PHANO (Histone H2B OS=Phaeosphaeria nodorum GN=HTB1 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.050e-26 Identity = 59/80 (73.75%), Postives = 71/80 (88.75%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFIND--IFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 234 QVHPD GIS++AM I+NSF+ IFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 59 QVHPDTGISNRAMSILNSFVTTTHIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 138
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B2_ARATH (Histone H2B.2 OS=Arabidopsis thaliana GN=At1g08170 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 9.336e-23 Identity = 48/75 (64.00%), Postives = 67/75 (89.33%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKF 225 QVHPD+GI+SKAM ++N F+ D+FE++AQEA+RL+ Y K+ T++SREI+ AVRLVLPGEL++HAV+EG+KAV+ F Sbjct: 161 QVHPDLGITSKAMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREIEAAVRLVLPGELSRHAVAEGSKAVSNF 235
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_TRYCR (Histone H2B OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.436e-17 Identity = 41/76 (53.95%), Postives = 61/76 (80.26%), Query Frame = 1 Query: 4 VHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 231 ++ + +S + M I+NSF+ND+FE++A EA+ + R NKK T+ +RE+QTAVRLVLP +LAKHA++EGTKAV+ +S Sbjct: 37 INNHMSMSGRTMKIVNSFVNDLFERIACEAATVVRVNKKRTLGARELQTAVRLVLPADLAKHAMAEGTKAVSHASS 112
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BV3_DICDI (Histone H2B.v3 OS=Dictyostelium discoideum GN=H2Bv3 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.705e-16 Identity = 40/68 (58.82%), Postives = 55/68 (80.88%), Query Frame = 1 Query: 22 ISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKF 225 ISSKAM +MNSF++DIF+++A EAS LA+ K+ T+ SR+IQ AVR++L GELAKHA+ +G AV K+ Sbjct: 80 ISSKAMSVMNSFVHDIFDRIATEASGLAKKKKRQTLHSRDIQVAVRIILTGELAKHAILQGMTAVNKY 147
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_LEIEN (Histone H2B OS=Leishmania enriettii PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 4.962e-16 Identity = 38/72 (52.78%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 4 VHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVT 219 ++ + +S + M I+NS++ND+ E++A EA+ + R +KK T+ +RE+QTAVRLVLP ELAKHA++EGTKAV+ Sbjct: 36 INSHMSMSGRTMKIVNSYVNDVMERIAMEAASIVRAHKKLTLGAREVQTAVRLVLPPELAKHAMAEGTKAVS 107
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_ENTIV (Histone H2B OS=Entamoeba invadens PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.444e-15 Identity = 38/73 (52.05%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 4 VHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 222 V PDIGI+ ++ +M+SF+ DIFE++A +AS L R +K T+T++EI+TA +L+L G+L KHAVSEG AV + Sbjct: 50 VFPDIGITLPSISVMDSFVRDIFERIAMDASSLTRNYQKSTLTTKEIETATKLILKGDLNKHAVSEGQSAVKR 122
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2B_LILLO (Histone H2B.1 OS=Lilium longiflorum PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.165e-15 Identity = 40/77 (51.95%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 231 QV P++GISSK+M IMN+F+ F+ +A+EAS LA+Y+KK TIT +E++ AV+LVLP +L ++A +G +AV F S Sbjct: 64 QVRPELGISSKSMLIMNNFVVHNFQNIAKEASILAQYSKKKTITVKELKAAVKLVLPHQLLEYADRDGDRAVHNFES 140
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BFM_HUMAN (Histone H2B type F-M OS=Homo sapiens GN=H2BFM PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.723e-14 Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 222 QVH + +S +A+ +M+S I+DI +++A EA +LA Y K+ TITSR+IQ AVRL+LPG++ K A ++GT A + Sbjct: 173 QVHQGLSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246
BLAST of CF832749 vs. ExPASy Swiss-Prot
Match: H2BWT_HUMAN (Histone H2B type W-T OS=Homo sapiens GN=H2BFWT PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 4.644e-14 Identity = 37/74 (50.00%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 1 QVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 222 QVH + +S +A+ +M+S ++DI +++A EA RLAR K+ TIT+ E + AVRL+LPG++ K A SEGTKAV + Sbjct: 91 QVHQGLSLSREAVSVMDSLVHDILDRIATEAGRLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164 The following BLAST results are available for this feature:
BLAST of CF832749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832749 ID=CF832749; Name=CF832749; organism=Citrus sinensis; type=EST; length=474bpback to top |