CF832786

Overview
NameCF832786
Unique NameCF832786
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1050 contig Csv1_Contig1050:196..992. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832786 vs. ExPASy Swiss-Prot
Match: LAC12_ORYSJ (Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17
Identity = 57/162 (35.19%), Postives = 81/162 (50.00%), Query Frame = -2
Query:  206 AINNVSLNLPPTPYLGSIKYGL-KDAFDQNGP-----PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGM 670
            +INNVS  LP T  L S   G  K  +  N P     P N++       PP N N   G+ V +L     V++++Q+ + +    +E+HP HLHG +F+V+G+G G F   ++              V  P G W A+RF ADNPG W  HCH+E H   G+
Sbjct:  395 SINNVSFVLPATALLQSHFAGKSKGVYASNFPYYPLNPFNYTGT-----PPNNTNVMNGTKVLVLPYGANVELVMQDTSILG---AESHPLHLHGFNFFVVGQGFGNFDPINDPAKFNLYDPVERNTVGVPAGGWVAIRFHADNPGVWFMHCHLEVHMSWGL 548          
BLAST of CF832786 vs. ExPASy Swiss-Prot
Match: LAC3_ARATH (Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.508e-17
Identity = 57/170 (33.53%), Postives = 82/170 (48.24%), Query Frame = -2
Query:  197 AINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTT-----------LGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 670
            ++NN+S  LP +  +    Y         G P  F+ ++  + PPV  + T            G+  Y L   + V ++LQ+ + + P   E HP HLHG+ F+V+G G G F  + D            NT    P GW A+RFVADNPGAW  HCHI+ H   G+ +V
Sbjct:  390 SMNNMSFVLPRSNSVMQAYY--------QGTPGIFTTDFPPV-PPVQFDYTGNVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTP---ENHPMHLHGYQFYVVGSGFGNFNPRTDPARFNLFDPPERNTIGTPPGGWVAIRFVADNPGAWFMHCHIDSHLGWGLAMV 547          
BLAST of CF832786 vs. ExPASy Swiss-Prot
Match: LAC24_ORYSJ (Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC24 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.360e-17
Identity = 54/165 (32.73%), Postives = 76/165 (46.06%), Query Frame = -2
Query:  197 AINNVSLNLPPTPYLGSIKY-GLKDAFDQNGPPENFSNEYDVMKPPVNANTTL-----GSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVV 670
            ++NN S  LP T  +    Y G  D       P+     +D      + N TL      + V  L  N+TV ++LQN   +     E+HP HLHG +F+VL +G G + +  +              V  P G W  +RFVADNPG W  HCH + H   G+G+V
Sbjct:  395 SMNNASFILPNTTSMLEAMYKGSIDGVYTRDFPDTPPIVFDYTADASDDNATLKHTFKSTKVKTLKYNSTVQMVLQNTRLVS---KESHPMHLHGFNFFVLAQGFGNYNETTDPAKFNLVDPQERNTVAVPTGGWAVIRFVADNPGVWFMHCHFDAHLEFGLGMV 556          
BLAST of CF832786 vs. ExPASy Swiss-Prot
Match: LAC1_ARATH (Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.388e-17
Identity = 73/232 (31.47%), Postives = 108/232 (46.55%), Query Frame = -2
Query:  149 FSNKIFALMGSPKP---PTNFHRRLTL---LNTQN-----TINGFTKW----AINNVSLNLPPTPYLGSI-KYGLKDAFDQNGPPENFSNEYDVMK-PPV--NANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG-VETVGNIPNQAL 781
            FS+ I +L  +  P   PT   +R+     LN Q+     T +G+       ++NN+S   PP   L S  K   K  F  + P E   N +D     PV  N NT  G+ ++ +   + ++++ Q  + +     E HP H+HGH+F+V+GRG G F  E +                 P G W A+R  ADNPG W  HCH+E H   G    LA+G +   G +P+Q L
Sbjct:  348 FSDSIKSLGSAKYPCKVPTKIDKRVITTISLNLQDCPLNQTCDGYAGKRFFASMNNISFVRPPISILESYYKKQSKGVFSLDFP-EKPPNRFDFTGVDPVSENMNTEFGTKLFEVEFGSRLEIVFQGTSFLN---IENHPLHVHGHNFFVVGRGFGNFDPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWG----LAMGFIVKDGPLPSQTL 571          
BLAST of CF832786 vs. ExPASy Swiss-Prot
Match: LAC17_ARATH (Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.388e-17
Identity = 59/196 (30.10%), Postives = 90/196 (45.92%), Query Frame = -2
Query:  206 KIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDA-FDQNGP-----PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGM 772
            K F  +G    P N     T     NT       +I+N+S  +P    L S   G     +    P     P N++       PP N   + G+ + +L  NT+V++++Q+ + +    +E+HP HLHG +F+V+G+G G F    +              V  P G W A+RF+ADNPG W  HCH+E H   G+
Sbjct:  366 KFFFTVGLGTNPCNHKNNQTCQGPTNTT--MFAASISNISFTMPTKALLQSHYSGQSHGVYSPKFPWSPIVPFNYTGT-----PPNNTMVSNGTNLMVLPYNTSVELVMQDTSILG---AESHPLHLHGFNFFVVGQGFGNFDPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLEVHTSWGL 551          
BLAST of CF832786 vs. ExPASy Swiss-Prot
Match: LAC3_ORYSJ (Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.777e-17
Identity = 58/173 (33.53%), Postives = 83/173 (47.98%), Query Frame = -2
Query:  179 AINNVSLNLPPTP-YLGSIKYGLKDAFDQNGP---PENFS----NEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVE 670
            ++NN+S   P T   L +  YG+   F  + P   P  F     N    +  PV A       +Y L   + V ++LQ+ + + P   E HP H+HG+DF++L  G G F  K+D            NT  +   GW  +RFVADNPG W  HCH++   HI  G+ +A  VE
Sbjct:  386 SMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRYLWQPVPATK-----LYKLKFGSVVQIVLQDTSIVSP---ENHPIHIHGYDFYILAEGFGNFDPKKDAKKFNYVDPPQRNTVAVPTNGWAVIRFVADNPGVWLMHCHLD--VHITWGLAMAFLVE 548          
BLAST of CF832786 vs. ExPASy Swiss-Prot
Match: LAC7_ARATH (Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.277e-16
Identity = 52/168 (30.95%), Postives = 82/168 (48.81%), Query Frame = -2
Query:  188 AINNVSLNLPPT-PYLGSIKYGLKDAFDQNGPPE-----NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 670
            +++N S  LP     L ++ + +K  F  + P +     +++N       P    T   +   +L  NTTV+V+LQN   I    +E+HP HLHG +F VL +G G +    +              +  P G W  +RF A+NPGAW FHCHI+ H   G+G++  +
Sbjct:  383 SMSNHSFVLPKKLSILEAVFHDVKGIFTADFPDQPPVKFDYTNPNVTQTNPGLLFTQKSTSAKILKFNTTVEVVLQNHALIA---AESHPMHLHGFNFHVLAQGFGNYDPSRDRSKLNLVDPQSRNTLAVPVGGWAVIRFTANNPGAWIFHCHIDVHLPFGLGMIFVV 547          
BLAST of CF832786 vs. ExPASy Swiss-Prot
Match: LAC21_ORYSJ (Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC21 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16
Identity = 57/164 (34.76%), Postives = 76/164 (46.34%), Query Frame = -2
Query:  197 AINNVSLNLPPTPYLGSIKYG-----LKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 670
            ++NNVS   P    L +  YG      +D F  N  P   +   D  +P V   T  G+ V +L   T V+V+ Q+ +       E+HP HLHG  F+V+G G GKF    +            + V  P  GW A+RF ADNPG W  HCH + H   GM  V
Sbjct:  406 SLNNVSFVSPAIDVLHAYYYGSGRGVYEDDFPNNPAPVFVNLTGDNDRPGV---TKHGAKVKVLEYGTVVEVVFQDTSF------ESHPMHLHGFAFYVVGLGSGKFDDRRDPATYNLLDPPYQSTVSVPKAGWAAIRFRADNPGVWFMHCHFDRHMVWGMNTV 560          
BLAST of CF832786 vs. ExPASy Swiss-Prot
Match: LAC9_ARATH (Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.178e-16
Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = -2
Query:  206 SGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTK-EDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 511
            + V  +  N+TV+++LQN   + P   E+HP HLHG +F+VLG G G +    D            NT  + P GW  LRF+A+NPG W FHCH++ H  +G+
Sbjct:  443 TSVKTIRFNSTVEIVLQNTGILTP---ESHPMHLHGFNFYVLGYGFGNYDPIRDARKLNLFNPQMHNTVGVPPGGWVVLRFIANNPGIWLFHCHMDAHLPLGI 542          
BLAST of CF832786 vs. ExPASy Swiss-Prot
Match: LAC25_ORYSJ (Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16
Identity = 45/130 (34.62%), Postives = 62/130 (47.69%), Query Frame = -2
Query:  194 PPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 580
            PP  F    D         TT  + V  L  N TV+++LQN   I     E+HP H+HG +F++L +G G + K                 +  P G W  +RFVADNPG W  HCH + H  +G+ +VL
Sbjct:  428 PPVVFDYTGDESDNATMQFTTKSTKVKTLRYNETVEMVLQNTRLIA---KESHPMHIHGFNFFILAQGFGNYDKRRAERRFNLVDPQERNTIAVPTGGWAVIRFVADNPGMWYMHCHFDAHISLGLAMVL 554          
The following BLAST results are available for this feature:
BLAST of CF832786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
LAC12_ORYSJ1.155e-1735.19Laccase-12/13 OS=Oryza sativa subsp. japonica GN=L... [more]
LAC3_ARATH1.508e-1733.53Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=... [more]
LAC24_ORYSJ3.360e-1732.73Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC1_ARATH4.388e-1731.47Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=... [more]
LAC17_ARATH4.388e-1730.10Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 S... [more]
LAC3_ORYSJ9.777e-1733.53Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 ... [more]
LAC7_ARATH1.277e-1630.95Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=... [more]
LAC21_ORYSJ1.668e-1634.76Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC9_ARATH2.178e-1639.81Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=... [more]
LAC25_ORYSJ2.845e-1634.62Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02G23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832786 ID=CF832786; Name=CF832786; organism=Citrus sinensis; type=EST; length=797bp
TTTTTTTTTTTTTTTATTCACTCCGAAATTTTATTAATATAAATATCAAA
ACAACAATAGAAACTCCAGGAATAAAGTACATAAAACAAACTAGCTAGCC
TCAATTTTGTTTAGGGTTCATGAACCTTTTCCCAGTCAAACCACAAGCCA
ACGCCTGGTTTGGAATATTACCAACGGTTTCAACACCAAGAGCAAGAACC
ACACCCATTCCAATATGGAAATGGGGCTCAATATGGCAGTGAAATGCCCA
AGCACCTGGATTATCAGCAACAAATCTTAAAGCAGTCCAGCCATATGGGA
ATATCACCGCAGTATTTTTCAATGGTGGATTCTTCAAGTTAAATTTCTTC
TCATCTTCTTTCGTAAACTTCCCTTCTCCGCGCCCTAATACCCAAAAATC
ATGCCCATGCAAATGCCAAGGGTGGGTTTCACTCAAGTTTGGCCTTATCG
CGTTTGCATTTTGAAGTATAACATCAACTGTGGTGTTTAAACCAAGCATG
TAAACCCCACTTCCAAGAGTTGTATTAGCGTTTACAGGAGGTTTCATCAC
GTCATACTCATTCGAGAAGTTTTCGGGGGGACCATTCTGATCAAAAGCAT
CTTTAAGACCATATTTGATGGATCCTAAGTAAGGAGTGGGGGGTAAATTC
AGGGACACATTGTTAATAGCCCACTTAGTGAACCCGTTAATGGTGTTTTG
AGTGTTAAGAAGGGTGAGCCGACGGTGGAAATTTGTGGGAGGCTTGGGGG
ATCCCATTAGGGCAAATATTTTGTTGGAGAATGATTTGCTGTGATCA
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