CF832787

Overview
NameCF832787
Unique NameCF832787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3764 contig Csv1_Contig3764:525..1242. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC10_ARATH (Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.300e-19
Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 1
Query:  259 AINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 702
            AINN++  +P T  L +  + L   +  + P +         KPP N  T   + +Y L  N+TV V+LQ+   + P   E HP HLHG +F+V+G G G + +K+D             T  +   GW A+RF ADNPG W  HCH+E
Sbjct:  380 AINNITFKMPKTALLQAHYFNLTGIYTTDFPAKPRRVFDFTGKPPSNLATMKATKLYKLPYNSTVQVVLQDTGNVAP---ENHPIHLHGFNFFVVGLGTGNYNSKKDSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGVWFMHCHLE 525          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC10_ORYSJ (Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18
Identity = 74/240 (30.83%), Postives = 107/240 (44.58%), Query Frame = 1
Query:   55 LLNYHPTSASK-IPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRL---------------------TLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLK-DAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 702
            +L Y P    K +PL  P + P  +D   +  F+ K+ +L   P  P+N  RR+                     T     NT   FT  +INNVS ++P T  L +   G     +  + P            PP N N + G+ V +L  N +V+V+LQ+ + +    +E+HP HLHG DF+V+G+G G +                   V  P G W A+RF ADNPG W  HCH+E
Sbjct:  313 VLEYAPPGHIKSLPLLRPSL-PALNDTAFAAGFAAKLRSL-ACPDYPSNVPRRVDKPFFFAVGLGTTPCPGSNNQTCQGPTNTTK-FTA-SINNVSFDMPTTALLQAHYTGQSAGVYTADFPASPLEPFNYTGTPPNNTNVSNGTRVVVLPYNASVEVVLQDTSILG---AESHPLHLHGFDFFVVGQGTGNYDPSKHPAEFNLVDPVQRNTVGVPAGGWVAIRFFADNPGVWFMHCHLE 545          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC11_ARATH (Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 69/230 (30.00%), Postives = 110/230 (47.83%), Query Frame = 1
Query:   55 LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP---PTNFHRRLTL-----LNTQNT-INGFTKWA-INNVSLNLPPTPYLGSIKYGLKDAFDQN---GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 702
            +L Y     + +P+ P    P  +D   +  ++ K+ +L     P   P    RRL       +N   T +NG    A INN++  +P T  L +    +   F  +    PP+ F+  Y  +    N  T+ G+ +  +  NTT++++LQ+ N +     E+HP+HLHG++F+V+G G G F  K+D             T  +   GW A+RF ADNPG W  HCH+E
Sbjct:  302 ILQYKGVPNTVLPILPKLPLP--NDTSFALDYNGKLKSLNTPNFPALVPLKVDRRLFYTIGLGINACPTCVNGTNLAASINNITFIMPKTALLKAHYSNISGVFRTDFPDRPPKAFN--YTGVPLTANLGTSTGTRLSRVKFNTTIELVLQDTNLLTV---ESHPFHLHGYNFFVVGTGVGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLE 524          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC4_ORYSJ (Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18
Identity = 67/230 (29.13%), Postives = 106/230 (46.09%), Query Frame = 1
Query:   70 PTSASKIPLSP--PPITPRWDDYDHSKSFSNKIFALMGSPKP---PTNFHRRLTL------------LNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDA-FDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 702
            P++AS +   P   P  P+ +D D   +F++K+ +L     P   P +  +R               +  Q   N     ++NNVS  LP    L S   GL    +  + P    S       PP N N   G+ + +L  NT+V++++Q+ + +     E+HP HLHG +F+V+G+G G +   ++              V  P G W A+RF+ADNPG W  HCH+E
Sbjct:  320 PSAASFVKGLPLFKPTLPQLNDTDFVTNFTDKLRSLATPEYPAAVPQSVDKRFFFTVGLGTLPCPANMTCQGPNNTQMAASMNNVSFVLPARALLQSHFTGLSSGVYAPDFPVAPLSPFNYTGTPPNNTNVKTGTKLLVLRYNTSVELVMQDTSILG---IESHPLHLHGFNFFVIGQGFGNYDAVNDPAKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLE 546          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC17_ARATH (Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 71/246 (28.86%), Postives = 108/246 (43.90%), Query Frame = 1
Query:   40 PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP---PTNFHRRLTLL----------NTQNTINGFTKW-----AINNVSLNLPPTPYLGSIKYGLKDA-FDQNGP-----PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 702
            PP  T   +  TS   + L  P I P  +D + +  FSNK+ +L     P   P N  R+                  T  G T       +I+N+S  +P    L S   G     +    P     P N++       PP N   + G+ + +L  NT+V++++Q+ + +    +E+HP HLHG +F+V+G+G G F    +              V  P G W A+RF+ADNPG W  HCH+E
Sbjct:  308 PPKQTKGAHSRTSIKNLQLFKP-ILPALNDTNFATKFSNKLRSLNSKNFPANVPLNVDRKFFFTVGLGTNPCNHKNNQTCQGPTNTTMFAASISNISFTMPTKALLQSHYSGQSHGVYSPKFPWSPIVPFNYTGT-----PPNNTMVSNGTNLMVLPYNTSVELVMQDTSILG---AESHPLHLHGFNFFVVGQGFGNFDPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLE 544          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC14_ARATH (Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17
Identity = 53/152 (34.87%), Postives = 77/152 (50.66%), Query Frame = 1
Query:  259 AINNVSLNLPPTPYLGSIKYGLKDAFDQN---GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPY-GWTALRFVADNPGAWAFHCHIE 702
            +INN+S   P    L +    +   F ++    PP  F+   + +  P    T  G+ V +L  N++V++ILQ       N+   HP HLHG++F+V+G G G F +  +            T V  P  GWTA+RFVA+NPG W  HCHIE
Sbjct:  392 SINNISFVNPSVDILRAYYRHIGGVFQEDFPRNPPTKFNYTGENLPFP----TRFGTKVVVLDYNSSVELILQGTTVWASNI---HPIHLHGYNFYVVGSGFGNFDRRKDPLRYNLVDPPEETTVGVPRNGWTAVRFVANNPGVWLLHCHIE 536          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC12_ORYSJ (Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17
Identity = 70/232 (30.17%), Postives = 105/232 (45.26%), Query Frame = 1
Query:   73 TSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPT-------NFHRRLTLLNTQNTINGFTKW--------AINNVSLNLPPTPYLGSIKYGL-KDAFDQNGP-----PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 702
            T+A KI     P  P+ +D +   +F+ K+ +L  +  P          F   + L      +NG  +         +INNVS  LP T  L S   G  K  +  N P     P N++       PP N N   G+ V +L     V++++Q+ + +    +E+HP HLHG +F+V+G+G G F   ++              V  P G W A+RF ADNPG W  HCH+E
Sbjct:  318 TAAGKIVPIFSPTLPQINDTNAVSNFTAKLRSLASAGYPAAVPQQVDHRFFFTVGLGTHPCAVNGTCQGPNGSRFAASINNVSFVLPATALLQSHFAGKSKGVYASNFPYYPLNPFNYTGT-----PPNNTNVMNGTKVLVLPYGANVELVMQDTSILG---AESHPLHLHGFNFFVVGQGFGNFDPINDPAKFNLYDPVERNTVGVPAGGWVAIRFHADNPGVWFMHCHLE 541          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC3_ARATH (Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.264e-17
Identity = 69/225 (30.67%), Postives = 103/225 (45.78%), Query Frame = 1
Query:  106 PITPRWDDYDHSKSFSNKIFALMGSPKPPTN-----FHRRLTLLNTQNTI-------NGFTKWA--INNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTT-----------LGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 702
            P+ P ++D   + +F+N++     +P P        F   L L+N  N         NG T++A  +NN+S  LP +  +    Y         G P  F+ ++  + PPV  + T            G+  Y L   + V ++LQ+ + + P   E HP HLHG+ F+V+G G G F  + D             T    P GW A+RFVADNPGAW  HCHI+
Sbjct:  326 PVLPGFNDTATATAFTNRLRYWKRAPVPQQVDENLFFTVGLGLINCANPNSPRCQGPNG-TRFAASMNNMSFVLPRSNSVMQAYY--------QGTPGIFTTDFPPV-PPVQFDYTGNVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTP---ENHPMHLHGYQFYVVGSGFGNFNPRTDPARFNLFDPPERNTIGTPPGGWVAIRFVADNPGAWFMHCHID 537          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC14_ORYSJ (Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC14 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.264e-17
Identity = 57/171 (33.33%), Postives = 81/171 (47.37%), Query Frame = 1
Query:  232 NTINGFTKWAINNVSLNLPPTPYL----GSIKYGLKDAFDQNGPPE--NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF---TKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPPFPY 717
            N   G    ++NNVS  LP T  L     S   G+      + PP   +F+N   V +      T+ G+ V  L  N TV+V+LQN   +    +E HP HLHG +F+VL +G G +    ++ +            T  + P GW  +RF ADNPG W  HCH+E   P+
Sbjct:  388 NRTRGSLAASMNNVSFQLPATMSLLEASRSRSSGVYTRDFPDRPPVMFDFTNAAAVNRNMSLMVTSKGTRVKALRYNETVEVVLQNTAVLG---TENHPLHLHGFNFYVLAQGTGNYYYLIRKKKIRKNLVNPQQRNTIAVPPGGWAVIRFTADNPGVWLMHCHLEAHLPF 555          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC8_ARATH (Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17
Identity = 71/255 (27.84%), Postives = 107/255 (41.96%), Query Frame = 1
Query:   31 PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPK-PPTNFHRRLTLLNTQNT--------------INGFTKWAINNVSLNLPPT-----PYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTL-----GSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTK-EDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPPFPY 717
            P   P   L+ Y   ++S  P  P  + P  +D   +  F++ I +L+G P   P   H    +  T                 +      ++NN +  +P        Y  +I     D F  N PP  F  +Y   +   N +  +      + V  +  N+TV+++LQN   I P   E+HP HLHG +F+VLG G G +    D             T  + P GW  LRF+A+NPG W FHCH++   PY
Sbjct:  292 PDIKPTRGLIVYQGATSSSSPAEP--LMPVPNDMSTAHRFTSNITSLVGGPHWTPVPRHVDEKMFITMGLGLDPCPAGTKCIGPLGQRYAGSLNNRTFMIPERISMQEAYFYNISGIYTDDFP-NQPPLKF--DYTKFEQRTNNDMKMMFPERKTSVKKIRFNSTVEIVLQNTAIISP---ESHPMHLHGFNFYVLGYGFGNYDPIRDARKLNLFNPQMHNTVGVPPGGWVVLRFIANNPGVWLFHCHMDAHLPY 538          
The following BLAST results are available for this feature:
BLAST of CF832787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
LAC10_ARATH2.300e-1935.57Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 S... [more]
LAC10_ORYSJ1.491e-1830.83Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC11_ARATH4.338e-1830.00Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 S... [more]
LAC4_ORYSJ5.666e-1829.13Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 ... [more]
LAC17_ARATH7.400e-1828.86Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 S... [more]
LAC14_ARATH4.796e-1734.87Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 S... [more]
LAC12_ORYSJ4.796e-1730.17Laccase-12/13 OS=Oryza sativa subsp. japonica GN=L... [more]
LAC3_ARATH6.264e-1730.67Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=... [more]
LAC14_ORYSJ6.264e-1733.33Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC8_ARATH8.182e-1727.84Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02G23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832787 ID=CF832787; Name=CF832787; organism=Citrus sinensis; type=EST; length=718bp
TGGATCTCACCCGTTGTTAGGGGAAGAAAACCTGCAACCCCTCCGGCCCT
AACACTCTTAAACTATCATCCCACTTCTGCTTCCAAAATCCCTCTCTCCC
CACCACCTATAACTCCTAGATGGGACGACTATGATCACAGCAAATCATTC
TCCAACAAAATATTTGCCCTAATGGGATCCCCCAAGCCTCCCACAAATTT
CCACCGTCGGCTCACCCTTCTTAACACTCAAAACACCATTAACGGGTTCA
CTAAGTGGGCTATTAACAATGTGTCCCTGAATTTACCCCCCACTCCTTAC
TTAGGATCCATCAAATATGGTCTTAAAGATGCTTTTGATCAGAATGGTCC
CCCCGAAAACTTCTCGAATGAGTATGACGTGATGAAACCTCCTGTAAACG
CTAATACAACTCTTGGAAGTGGGGTTTACATGCTTGGTTTAAACACCACA
GTTGATGTTATACTTCAAAATGCAAACGCGATAAGGCCAAACTTGAGTGA
AACCCACCCTTGGCATTTGCATGGGCATGATTTTTGGGTATTAGGGCGCG
GAGAAGGGAAGTTTACGAAAGAAGATGAGAAGAAATTTAACTTGAAGAAT
CCACCATTGAAAAATACTGCGGTGATATTCCCATATGGCTGGACTGCTTT
AAGATTTGTTGCTGATAATCCAGGTGCTTGGGCATTTCACTGCCATATTG
AGCCCCCATTTCCATATT
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