CF832787

Overview
NameCF832787
Unique NameCF832787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3764 contig Csv1_Contig3764:525..1242. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC9_ORYSJ (Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 52/155 (33.55%), Postives = 71/155 (45.81%), Query Frame = 1
Query:  259 AINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDV-MKPPVNAN-----TTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPY-GWTALRFVADNPGAWAFHCHIE 702
            ++NNVS   P    L +  Y       +    E+F N+    + PPVN       T  G+ V +L   T V+V+  + +      SE HP HLHG  F+V+GRG G F +  +              V  P  GW A+RF ADNPG W  HCH +
Sbjct:  402 SLNNVSFQSPAIDVLDAYYYSSGHGVYE----EDFPNKPTAFVDPPVNNGSGPLMTKRGTKVKVLEYGTVVEVVFHDLS------SENHPMHLHGFAFYVVGRGNGTFDESRDPATYNLVDPPFQNTVSVPRSGWAAIRFRADNPGVWFMHCHFD 546          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC23_ORYSJ (Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 52/161 (32.30%), Postives = 69/161 (42.86%), Query Frame = 1
Query:  259 AINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTL------------GSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPY-GWTALRFVADNPGAWAFHCHIE 702
            +INNVS  LP +         +  A     P   F+ ++    PPV  + T             G+ VY L   + V V+LQ  N       E HP HLHG+DF++L  G G F    +              V  P  GW  +RFVADNPG W  HCH++
Sbjct:  385 SINNVSFVLPSST-------SILQAHHHGAPGGVFTADFPA-SPPVQFDYTAQNVSRALWQPVPGTKVYKLKYGSAVQVVLQGTNIFA---GENHPIHLHGYDFYILAEGLGNFDAGADTAKFNMEDPPMRNTVGVPVNGWAVIRFVADNPGVWLMHCHLD 534          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC1_ORYSJ (Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 52/156 (33.33%), Postives = 71/156 (45.51%), Query Frame = 1
Query:  259 AINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPP---VNAN----TTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 702
            ++NNVS   P    L +  YG      +    ENF N+  V+  P   +N      T  G+ V +L   T V+V+ Q+ +       E HP HLHG  F+V+GRG G F +  +              V  P   W A+RF ADNPG W  HCH +
Sbjct:  399 SLNNVSFQNPAIDVLDAYYYGSGRGVYE----ENFPNKLTVIVNPTGDINGGGPLLTKRGTKVKVLEYGTVVEVVFQDLSI------ENHPMHLHGFTFYVVGRGSGTFDERRDPATYNLIDPPFQNTVSVPKSSWAAIRFRADNPGVWFMHCHFD 544          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC24_ORYSJ (Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC24 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.910e-14
Identity = 50/155 (32.26%), Postives = 70/155 (45.16%), Query Frame = 1
Query:  259 AINNVSLNLPPTPYLGSIKY-GLKDAFDQNGPPENFSNEYDVMKPPVNANTTL-----GSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 702
            ++NN S  LP T  +    Y G  D       P+     +D      + N TL      + V  L  N+TV ++LQN   +     E+HP HLHG +F+VL +G G + +  +              V  P G W  +RFVADNPG W  HCH +
Sbjct:  395 SMNNASFILPNTTSMLEAMYKGSIDGVYTRDFPDTPPIVFDYTADASDDNATLKHTFKSTKVKTLKYNSTVQMVLQNTRLVS---KESHPMHLHGFNFFVLAQGFGNYNETTDPAKFNLVDPQERNTVAVPTGGWAVIRFVADNPGVWFMHCHFD 546          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC8_ORYSJ (Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.886e-13
Identity = 38/123 (30.89%), Postives = 59/123 (47.97%), Query Frame = 1
Query:  346 GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPPFP 714
            G P  +S ++    PP+       + V  +  N  V+V+LQ+        +E HP HLHG DF++L +G G+F    +            T  +   GW  +RF+A+NPG W  HCH++   P
Sbjct:  403 GVPGVYSEDFPDFPPPMQGFRK-ATAVKKVKYNDVVEVVLQSEQYSSTLGTENHPIHLHGFDFYLLAQGLGRFNPSMKSKYNLVDPQVRNTVAVPAGGWAVIRFMANNPGMWFMHCHLDAHLP 524          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC25_ORYSJ (Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.886e-13
Identity = 41/119 (34.45%), Postives = 55/119 (46.22%), Query Frame = 1
Query:  349 PPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 702
            PP  F    D         TT  + V  L  N TV+++LQN   I     E+HP H+HG +F++L +G G + K                 +  P G W  +RFVADNPG W  HCH +
Sbjct:  428 PPVVFDYTGDESDNATMQFTTKSTKVKTLRYNETVEMVLQNTRLIA---KESHPMHIHGFNFFILAQGFGNYDKRRAERRFNLVDPQERNTIAVPTGGWAVIRFVADNPGMWYMHCHFD 543          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC16_ORYSJ (Putative laccase-16 OS=Oryza sativa subsp. japonica GN=LAC16 PE=5 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.886e-13
Identity = 48/156 (30.77%), Postives = 71/156 (45.51%), Query Frame = 1
Query:  259 AINNVSLNLPPTPYLGSIKYGL-KDAFDQNGPPENFSNEYDVMKPPVNAN------TTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 702
            ++NNVS   P    L +  YG  +  ++++ P    +   +    P   N      T  G+ V ++   T V+V+ Q+ +      SE HP HLHG  F+V+GRG G F +  +              V  P   W A+RF ADNPG W  HCH +
Sbjct:  289 SLNNVSFESPAIDVLDAYYYGSGRGVYEEDFP----NKPVNAFVNPTGDNGGRPLLTKRGTKVKVVEYGTVVEVVFQDLS------SENHPMHLHGFAFYVVGRGSGTFDERRDPATYNLVDPPFQNTVSVPKSSWAAIRFRADNPGVWFMHCHFD 434          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC5_ORYSJ (Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13
Identity = 62/224 (27.68%), Postives = 98/224 (43.75%), Query Frame = 1
Query:   46 ALTLLNYHPTSASKIPLS--PPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFS-NEYDVMKPPVNA-NTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 702
            A+ +L Y PT AS    +  P P  PR++D +   +FS+K F  + + + P    R +             +  +  V L   P P   + +         NG     S N    ++P V          V  L  NT+V+++LQ  +      +E+HP H+HG +F+V+G+G G +   ++              V  P G W A+RF+ADNPG W  HCH +
Sbjct:  314 AVAVLEYAPTRASATGNNNLPLPPLPRYNDTNAVANFSSK-FRSLATARYPARVPRAVD------------RHVLFTVGLGTDPCPSNQTCQ-------GPNGTKFAASINNNSFVRPRVALLEAHCQRRVVPLAFNTSVELVLQGTSI---QGAESHPLHMHGFNFFVVGQGFGNYDPVNDPANYNLVDPVERNTVSVPTGGWVAVRFLADNPGVWLMHCHFD 514          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSJ (Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 53/193 (27.46%), Postives = 88/193 (45.60%), Query Frame = 1
Query:  157 KIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTP------YLGSIKYGLKDAFDQNGP-PENFSNEYDVMKPPVNA---NTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 702
            +IF ++G     T    R T    Q ++       +NNVS   P T       Y G+ +    + F    P P N++N   +   P+      T   + +     NT+V++I Q++  +   +S+++P HLHG+D ++L +G G F  + +              ++ P G W A+RF+ DNPG W  HCH E
Sbjct:  358 RIFIILGLG---TICRGRNTTCKRQRSLETIEVATMNNVSFTHPNTTALLERYYDGTPEGVYTEDFPVRPPRPYNYTNPALIPPGPLEEVLEPTFKATKLKRFKYNTSVEIIFQSSTLL---MSDSNPMHLHGYDVFLLAQGLGSFNAKRDIRKFNYHNPQLRNTILVPRGGWAAVRFITDNPGMWYLHCHFE 544          
BLAST of CF832787 vs. ExPASy Swiss-Prot
Match: LAC6_ORYSJ (Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13
Identity = 50/159 (31.45%), Postives = 74/159 (46.54%), Query Frame = 1
Query:  262 INNVSLNLPPTPYLGSIKYG-------LKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKE--DEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPPF 711
            +NNVS  LP T  +    Y         +D  DQ     ++++   +   P+ +  +  + V  L  N TV+++LQN   +     E+HP HLHG +F+V+ +G G    E                T  +   GW  +RFVADNPG WA HCHI+  F
Sbjct:  395 MNNVSFALPNTVSMLEALYRNTADGVYTRDFPDQPPVAFDYTSRGLLGNSPLASTGSPSTKVKTLRYNATVEMVLQNTALVG---LESHPMHLHGFNFFVVAQGFGNNDGEAAGAGEFNLVNPQERNTVAVPTGGWAVIRFVADNPGMWAMHCHIDSHF 550          
The following BLAST results are available for this feature:
BLAST of CF832787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
LAC9_ORYSJ1.306e-1433.55Putative laccase-9 OS=Oryza sativa subsp. japonica... [more]
LAC23_ORYSJ1.306e-1432.30Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC1_ORYSJ1.306e-1433.33Putative laccase-1 OS=Oryza sativa subsp. japonica... [more]
LAC24_ORYSJ2.910e-1432.26Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC8_ORYSJ1.886e-1330.89Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 ... [more]
LAC25_ORYSJ1.886e-1334.45Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC16_ORYSJ1.886e-1330.77Putative laccase-16 OS=Oryza sativa subsp. japonic... [more]
LAC5_ORYSJ3.217e-1327.68Putative laccase-5 OS=Oryza sativa subsp. japonica... [more]
LAC20_ORYSJ4.202e-1327.46Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC6_ORYSJ5.488e-1331.45Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02G23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832787 ID=CF832787; Name=CF832787; organism=Citrus sinensis; type=EST; length=718bp
TGGATCTCACCCGTTGTTAGGGGAAGAAAACCTGCAACCCCTCCGGCCCT
AACACTCTTAAACTATCATCCCACTTCTGCTTCCAAAATCCCTCTCTCCC
CACCACCTATAACTCCTAGATGGGACGACTATGATCACAGCAAATCATTC
TCCAACAAAATATTTGCCCTAATGGGATCCCCCAAGCCTCCCACAAATTT
CCACCGTCGGCTCACCCTTCTTAACACTCAAAACACCATTAACGGGTTCA
CTAAGTGGGCTATTAACAATGTGTCCCTGAATTTACCCCCCACTCCTTAC
TTAGGATCCATCAAATATGGTCTTAAAGATGCTTTTGATCAGAATGGTCC
CCCCGAAAACTTCTCGAATGAGTATGACGTGATGAAACCTCCTGTAAACG
CTAATACAACTCTTGGAAGTGGGGTTTACATGCTTGGTTTAAACACCACA
GTTGATGTTATACTTCAAAATGCAAACGCGATAAGGCCAAACTTGAGTGA
AACCCACCCTTGGCATTTGCATGGGCATGATTTTTGGGTATTAGGGCGCG
GAGAAGGGAAGTTTACGAAAGAAGATGAGAAGAAATTTAACTTGAAGAAT
CCACCATTGAAAAATACTGCGGTGATATTCCCATATGGCTGGACTGCTTT
AAGATTTGTTGCTGATAATCCAGGTGCTTGGGCATTTCACTGCCATATTG
AGCCCCCATTTCCATATT
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