CF832795

Overview
NameCF832795
Unique NameCF832795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_YERPN (Phosphoribosylformylglycinamidine synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=purL PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 8.086e-13
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 241
            + ++ G  TE YP N NGS  G+ A+ S  GR   MMPHPER F      W+P+ W  D    SPW++MF+NAR+
Sbjct: 1223 FVNNHGVVTEQYPANPNGSANGITAVTSVSGRATVMMPHPERVFRTVSNSWHPEEWGED----SPWMRMFRNARK 1293          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_YERPE (Phosphoribosylformylglycinamidine synthase OS=Yersinia pestis GN=purL PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.086e-13
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 241
            + ++ G  TE YP N NGS  G+ A+ S  GR   MMPHPER F      W+P+ W  D    SPW++MF+NAR+
Sbjct: 1223 FVNNHGVVTEQYPANPNGSANGITAVTSVSGRATVMMPHPERVFRTVSNSWHPEEWGED----SPWMRMFRNARK 1293          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_YERPA (Phosphoribosylformylglycinamidine synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=purL PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 8.086e-13
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 241
            + ++ G  TE YP N NGS  G+ A+ S  GR   MMPHPER F      W+P+ W  D    SPW++MF+NAR+
Sbjct: 1223 FVNNHGVVTEQYPANPNGSANGITAVTSVSGRATVMMPHPERVFRTVSNSWHPEEWGED----SPWMRMFRNARK 1293          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_COLP3 (Phosphoribosylformylglycinamidine synthase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=purL PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 8.086e-13
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAR 238
            Y ++ G+ TE YP N NGS  G+ ++ + DGR   MMPHPER F      W+P +W  D    SPW++MF+NAR
Sbjct: 1247 YVNNYGDVTETYPANPNGSVDGITSLTTTDGRVTIMMPHPERVFRTVANSWHPDSWGED----SPWVRMFRNAR 1316          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_MANSM (Phosphoribosylformylglycinamidine synthase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=purL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.056e-12
Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAR 238
            Y D++  PTEVYP N NGS  G+ A+ + +GR   MMPHPER F      W+P++W+ D      W+++F+NAR
Sbjct: 1224 YVDNNIRPTEVYPANPNGSVDGITALSNTNGRVAIMMPHPERVFRTVSNSWHPEDWSED----GAWMRLFRNAR 1293          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_ERWCT (Phosphoribosylformylglycinamidine synthase OS=Erwinia carotovora subsp. atroseptica GN=purL PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.379e-12
Identity = 34/74 (45.95%), Postives = 42/74 (56.76%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAR 238
            Y +  G  TE YP N NGS  G+ A+ S  GR   MMPHPER F      W+P+ W  D     PW++MF+NAR
Sbjct: 1221 YINHYGQVTENYPANPNGSSNGITAVTSTSGRATVMMPHPERVFRTVSNSWHPEEWGED----GPWMRMFRNAR 1290          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_VIBVY (Phosphoribosylformylglycinamidine synthase OS=Vibrio vulnificus (strain YJ016) GN=purL PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.801e-12
Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 241
            + D+ GNPT+ YP N NGSP  +  + + DGR   MMPHPER F      W P+ W  +      W++MFQNAR+
Sbjct: 1224 FVDNLGNPTQQYPNNPNGSPNAITGLTTKDGRVTIMMPHPERVFRTVANSWAPEGWGEN----GAWMRMFQNARK 1294          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_VIBVU (Phosphoribosylformylglycinamidine synthase OS=Vibrio vulnificus GN=purL PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.801e-12
Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 241
            + D+ GNPT+ YP N NGSP  +  + + DGR   MMPHPER F      W P+ W  +      W++MFQNAR+
Sbjct: 1224 FVDNLGNPTQQYPNNPNGSPNAITGLTTKDGRVTIMMPHPERVFRTVANSWAPEGWGEN----GAWMRMFQNARK 1294          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_PHOLL (Phosphoribosylformylglycinamidine synthase OS=Photorhabdus luminescens subsp. laumondii GN=purL PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.168e-11
Identity = 33/75 (44.00%), Postives = 43/75 (57.33%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 241
            Y ++ G  TE YP N NGS  G+ A+ S DGR   MMPHPER        W+P  W  D     PW+++F+NAR+
Sbjct: 1222 YVNNYGQVTENYPANPNGSVNGITAVTSLDGRATVMMPHPERVSRTVNNSWHPDEWRED----GPWMRIFRNARK 1292          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_XYLFT (Phosphoribosylformylglycinamidine synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=purL PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11
Identity = 31/76 (40.79%), Postives = 40/76 (52.63%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 244
            Y +  G     YP N NGSP G+  + + DGR   +MPHPER        W P  W  D    +PWL++F+NAR W
Sbjct: 1249 YINGHGQAATHYPLNPNGSPNGITGLTTTDGRITILMPHPERTPRTINLSWCPNEWGED----APWLRLFRNARAW 1320          
The following BLAST results are available for this feature:
BLAST of CF832795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
PUR4_YERPN8.086e-1345.33Phosphoribosylformylglycinamidine synthase OS=Yers... [more]
PUR4_YERPE8.086e-1345.33Phosphoribosylformylglycinamidine synthase OS=Yers... [more]
PUR4_YERPA8.086e-1345.33Phosphoribosylformylglycinamidine synthase OS=Yers... [more]
PUR4_COLP38.086e-1345.95Phosphoribosylformylglycinamidine synthase OS=Colw... [more]
PUR4_MANSM1.056e-1244.59Phosphoribosylformylglycinamidine synthase OS=Mann... [more]
PUR4_ERWCT1.379e-1245.95Phosphoribosylformylglycinamidine synthase OS=Erwi... [more]
PUR4_VIBVY1.801e-1244.00Phosphoribosylformylglycinamidine synthase OS=Vibr... [more]
PUR4_VIBVU1.801e-1244.00Phosphoribosylformylglycinamidine synthase OS=Vibr... [more]
PUR4_PHOLL1.168e-1144.00Phosphoribosylformylglycinamidine synthase OS=Phot... [more]
PUR4_XYLFT1.525e-1140.79Phosphoribosylformylglycinamidine synthase OS=Xyle... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02H03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832795 ID=CF832795; Name=CF832795; organism=Citrus sinensis; type=EST; length=516bp
TTTGGCTCCACCAATATATTGTGATGATGATGGAAATCCTACAGAAGTTT
ACCCTTTTAATGTGAATGGCTCTCCCTTAGGAGTGGCAGCAATTTGTTCA
CCCGATGGAAGACATCTTGCTATGATGCCTCATCCAGAGCGTTGCTTCTT
AATGTGGCAGTACCCGTGGTACCCCAAGAACTGGAATGTGGACAAAAAGG
GCCCTAGCCCATGGTTAAAGATGTTCCAAAATGCCAGAGAATGGTGTTCT
TGAGATGGGTTAGTAACTCCCCCTTTCCATTTTCCCTTCAGGAAGGTTGC
TGCCTCTAATTGCTCGCTGATTCATTTCTGTGCTGATGTATGGTATGTTT
GATGCCGGGAAACCAGGGCTCTGATTGCTACAAAAAAAATCTGCAGACAT
TTTGAAGTGAGTTGTATTTGGCTTCTGATTTAGGCCAATTTTAGAAGACA
TCCGATGTGTTAATTTCTTTTGATAATTTTATTTGCAAGAATTACGTCCC
AAAAAAAAAAAAAAAA
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