CF832838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_CYAPA (Ferredoxin-1 OS=Cyanophora paradoxa GN=petF PE=1 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 7.046e-32 Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 3 Query: 234 MAVYKVKLI-GPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MAVYKV+LI G + + PDD YI+D+AE+ G++LPYSCRAGACSTCAG++V G+VDQSD SFLDD Q+ G+VLTCVAYP+SDC + TH+E LY Sbjct: 1 MAVYKVRLICEEQGLDTTIECPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKVVEGTVDQSDQSFLDDAQLAAGYVLTCVAYPSSDCTVKTHQEESLY 99
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_BRANA (Ferredoxin OS=Brassica napus PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.202e-32 Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 A YKVK I P GE+ E + DD Y++D+AE+AG++LPYSCRAG+CS+CAG++VSG VDQSD SFLDD Q+ +GFVLTC AYPTSD I THKE EL Sbjct: 1 ATYKVKFITPEGEQ-EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDVTIETHKEEEL 95
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER4_ARATH (Probable ferredoxin-4, chloroplastic OS=Arabidopsis thaliana GN=FD4 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.202e-32 Identity = 66/126 (52.38%), Postives = 89/126 (70.63%), Query Frame = 3 Query: 156 SPASLGSTRSVSKAFGLKCSSF---KASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 S A L + + + FGL S K A KVKLI P GEE E + +D I++SAE+AG+ELPYSCR+G C TC G++VSG VDQS GSFL+++Q++KG++LTC+A P DCV+YTHK+S+L Sbjct: 22 SQAQLTTRLNNTTYFGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_ORYSJ (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. japonica GN=ADI1 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.202e-32 Identity = 73/147 (49.66%), Postives = 91/147 (61.90%), Query Frame = 3 Query: 84 STVRLPTSCLFQAAPRSKKFSLVKSPASLGSTRSVSKAFGLKCSSFKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 S VRLP S AP + S++ + LG + A Y VKLI P+GE E PDD YI+D AE+ G++LPYSCRAG+CS+CAG++VSG +DQSD SFLDD Q+ G+VLTC AYP SD VI THKE +L Sbjct: 8 SQVRLPMSLRVATAPAPARVSVLPASNKLGD---------------RLRMQATYNVKLITPDGEV-ELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_ORYSI (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. indica GN=ADI1 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.202e-32 Identity = 73/147 (49.66%), Postives = 91/147 (61.90%), Query Frame = 3 Query: 84 STVRLPTSCLFQAAPRSKKFSLVKSPASLGSTRSVSKAFGLKCSSFKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 S VRLP S AP + S++ + LG + A Y VKLI P+GE E PDD YI+D AE+ G++LPYSCRAG+CS+CAG++VSG +DQSD SFLDD Q+ G+VLTC AYP SD VI THKE +L Sbjct: 8 SQVRLPMSLRVATAPAPARVSVLPASNKLGD---------------RLRMQATYNVKLITPDGEV-ELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_CYACA (Ferredoxin OS=Cyanidium caldarium GN=petF PE=3 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 9.202e-32 Identity = 63/99 (63.64%), Postives = 81/99 (81.82%), Query Frame = 3 Query: 234 MAVYKVKLIGPN-GEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 M YKVKL G + E + P+D YI+D+AE+ G++LPYSCRAGACSTCAG+++SG+VDQSD SFLDD+Q+++GFVLTCVAYPTS+C I TH+E LY Sbjct: 1 MTSYKVKLTNEKEGIDVEINCPNDQYILDAAEEQGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDEQIKEGFVLTCVAYPTSNCTILTHQEEALY 99
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_SOLAB (Ferredoxin OS=Solanum abutiloides PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.202e-31 Identity = 64/96 (66.67%), Postives = 77/96 (80.21%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 A YKVKL+ P+G EF+ PDD YI+D AE+ G +LPYSCRAG+CS+CAG++ +GSVDQSDG+FLDD Q+ GFVLTCVAYP SD I THKE EL Sbjct: 1 ATYKVKLVTPDGPV-EFECPDDEYILDRAEEEGHDLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEEL 95
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_LEUGL (Ferredoxin OS=Leucaena glauca PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.570e-31 Identity = 62/94 (65.96%), Postives = 79/94 (84.04%), Query Frame = 3 Query: 243 YKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 +KVKL+ P+G + EF+ PDD YI+D AE+ G+ELPYSCRAG+CS+CAG++V G +DQSD SFLDD+Q+E+G+VLTC AYP SD VI THKE EL Sbjct: 2 FKVKLLTPDGPK-EFECPDDVYILDQAEELGIELPYSCRAGSCSSCAGKLVEGDLDQSDQSFLDDEQIEEGWVLTCAAYPRSDVVIETHKEEEL 94
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.570e-31 Identity = 63/96 (65.62%), Postives = 77/96 (80.21%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 A YKVKL+ P+G EF+ PDD YI+D AE+ G +LPYSCRAG+CS+CAG++ +G+VDQSDG++LDD QM GFVLTCVAYP SD I THKE EL Sbjct: 1 ATYKVKLVTPDGPV-EFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.570e-31 Identity = 63/96 (65.62%), Postives = 77/96 (80.21%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 A YKVKL+ P+G EF+ PDD YI+D AE+ G +LPYSCRAG+CS+CAG++ +G+VDQSDG++LDD QM GFVLTCVAYP SD I THKE EL Sbjct: 1 ATYKVKLVTPDGPV-EFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95 The following BLAST results are available for this feature:
BLAST of CF832838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832838 ID=CF832838; Name=CF832838; organism=Citrus sinensis; type=EST; length=629bpback to top |