CF832847

Overview
NameCF832847
Unique NameCF832847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8502 contig Csv1_Contig8502:629..1322. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832847 vs. ExPASy Swiss-Prot
Match: Y1459_PYRHO (Uncharacterized sugar kinase PH1459 OS=Pyrococcus horikoshii GN=PH1459 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 53/162 (32.72%), Postives = 89/162 (54.94%), Query Frame = -3
Query:  208 PCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDK-AEVIKVSDVELEFLPGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYPKSFRGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGA 690
            P R   ++ +K  K   +L+++D NLRL LW   EE   +++    K A+++K S+ E+ +L     ++ + ++        L  +TLG  GCR         V +++VNP+DTTGAGDAF+ ALL  ++  + +      L ++ KFAN   A++T K+GA
Sbjct:  143 PSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQG-VEVKGSM--------LTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGL-----DLLKLGKFANLVAALSTQKRGA 289          
BLAST of CF832847 vs. ExPASy Swiss-Prot
Match: RBSK_HAEIN (Ribokinase OS=Haemophilus influenzae GN=rbsK PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 51/182 (28.02%), Postives = 91/182 (50.00%), Query Frame = -3
Query:  157 CRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEA-REQIMSIWDKAEVIKVSDVELEFLPGSDKIDDESAL---SLWHPN-LKLLLVTLGEHGCRYYPKSFRGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGAIPALPPEFEALNLLKGA 687
            C    LE   +  E  A ++    +++ L P+P +   ++++S+ D   +I  ++ E E L G +  D++SA+   S++H   ++ +++TLG  G     K     +  F V  +DTT AGD F G  +  L++++S         E ++F  A  AI+  KKGA  ++P   E L  L+ A
Sbjct:  135 CLLMQLETPLSGVELAAQIAKKNGVKVVLNPAPAQILSDELLSLID---IITPNETEAEILTGVEVADEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRIIKGFCVQAIDTTAAGDTFNGGFVTALLEEKS-------FDEAIRFGQAAAAISVTKKGAQSSIPTRQETLEFLEHA 306          
The following BLAST results are available for this feature:
BLAST of CF832847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
Y1459_PYRHO8.094e-1432.72Uncharacterized sugar kinase PH1459 OS=Pyrococcus ... [more]
RBSK_HAEIN9.894e-1228.02Ribokinase OS=Haemophilus influenzae GN=rbsK PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02I19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832847 ID=CF832847; Name=CF832847; organism=Citrus sinensis; type=EST; length=698bp
TTTTTTTTTTTTTTTTTAATACAGAAGAAACTTCTTTTCCTTGAATTCAA
AGCAACTTCCGTAGAAACAAAAAGAAAATTCCAAATACAAACAAAAAGAA
AATTCAAAATACAAACAAAAAAAAAAAATTGGAACTAATAATTTTGTTTA
TTATTACGCTCCTTTGAGTAAGTTGAGAGCTTCAAACTCTGGGGGTAGAG
CTGGAATTGCTCCCTTCTTGGGGGTAGTGATGGCTCCACAGGCATTTGCA
AATTTCAATATCTCCCGCAACCTTGGTTCATCCTCAAAAACAGATTGGTC
ATCAACAAGCTTCCCTAAAAGAGCACCAACAAATGCATCACCAGCGCCGG
TTGTATCTACTGGGTTCACATGAAAAGCATCCACTGCTCCTCTGAAACTC
TTGGGGTAGTATCTGCAGCCATGCTCACCAAGGGTGACCAAAAGGAGTTT
CAAGTTGGGATGCCAAAGCGACAATGCTGATTCATCATCAATCTTGTCAC
TCCCGGGGAGGAATTCAAGCTCCACATCACTGACTTTGATTACCTCGGCC
TTGTCCCAGATGCTCATTATCTGCTCGCGCGCCTCCTCCGGGGAGGGCCA
CAACGGTAGCCGGAGGTTGGGGTCGTATGAAAGAAGGGCTCCTGCTTCCT
TGGCTGCTTTCATTGCCTCCAAGTGCGCTGATCGGCATGGCTCCACCC
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