CF832855

Overview
NameCF832855
Unique NameCF832855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF832855 vs. ExPASy Swiss-Prot
Match: UMP6_ARATH (Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis thaliana GN=At1g47420 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.045e-13
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 2 
Query:  104 MGTLGRAVYTVGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLR 361
            MGTLGRA++TVG  IR T QA  R+G  LQG+++ ++ LSRHRTL+              VAP+AS+IGDVQ+ +GS I Y  V R
Sbjct:    1 MGTLGRAIHTVGNRIRGTAQAQARVGSLLQGSHHIEKHLSRHRTLIT-------------VAPNASVIGDVQINKGSFISYASVSR 73
The following BLAST results are available for this feature:
BLAST of CF832855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
UMP6_ARATH1.045e-1350.00Uncharacterized protein At1g47420, mitochondrial O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02I24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832855 ID=CF832855; Name=CF832855; organism=Citrus sinensis; type=EST; length=811bp
CTCTCCCAACACACCTCGCTCAACTTAAGAAACCCAAAACCTCTCTGAAC
TTGAGCTCCAAAAGTATCGACACTCAGTCACCGATCCCCAAAGCCAACAA
GAGATGGGAACCCTAGGGCGAGCAGTTTACACCGTTGGCTTCTGGATTCG
CGAAACCGGTCAGGCCCTTGATCGCCTCGGCTGCCGTCTCCAAGGCAACT
ACTACTTCCAAGAGCAACTGTCTAGGCATCGAACTCTCATGAACATATTT
GATAAAGCTCCCGCAGTCGACAAGGATGCATTTGTTGCTCCAAGTGCCTC
TATCATTGGTGATGTTCAAGTGGGAAGAGGGTCATCTATTTGGTATGGAT
GTGTTTTGAGAGGGGATGTGAATAGCATCAGTGTTGGATCAGGAACAAAT
ATACAGGACAACTCCCTTGTGCATGTTGCGAAGTCTAATCTAAGTGGGAA
GGTGCTACCGACTACTATTGGGGACAATGTTACTGTAGGCCATAGTGCTG
TTTTACATGGCTGTACTGTTGAGGACGAGGCCTTTGTTGGCATGGGAGCA
ACACTACTTGATGGTGTTGTTGTTGAGAGACATGGCATGGTTGCTGCTGG
ATCTCTTGTGAGGCAGAATACCAGGATCCCTTCTGGAGAGGTATGGGGAG
GCAATCCAGCAAAGTTCCTGAGAAAGCTCACTGATGAAGAAATAGCCTTT
ATTTCCCAGTCAGCCACCAATTATTCCAACTTGGCACAAGTTCATGCAGC
TGAGAATGCGAAGTCCTTCGATGAGATTGAATTTGAGAAAGTTCTTCGCA
AGAAGTTTGCA
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