CF832859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_BACV8 (Biosynthetic arginine decarboxylase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=speA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.472e-22 Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTQAMPG 367 Y S+F S+PD WAI +FPI+PI LDE+P L D+TCDSDGKI FI LP+H + G + YY+G+FL GAY+E LG +HNLFG + V V D +++ Q + G Sbjct: 456 YFCNFSLFQSLPDSWAIDQIFPIMPIQRLDEKPDRNATLQDITCDSDGKIANFISTRYVSHDLPVHSLKG-----KDAYYIGVFLVGAYQEILGDMHNLFGDTNAVHVTVDD--KGYSIDQVIDG 573
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PSEPK (Biosynthetic arginine decarboxylase OS=Pseudomonas putida (strain KT2440) GN=speA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.278e-22 Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQS 325 Y S+F S+PD WAI + PI+P+H LDE P R VL DLTCDSDGKI++++ TS+P+H + G Y LG+FL GAY+E LG +HNLFG V + Q+ Sbjct: 465 YICNFSVFQSLPDTWAIGQVLPIIPLHRLDEEPMRRAVLQDLTCDSDGKINQYVDEQSIETSMPVHAVKEG-----EDYLLGVFLVGAYQEILGDMHNLFGDTDSVNIYQN 570
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PROMS (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain AS9601) GN=speA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.278e-22 Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 Y+ LSIF SIPD WAI +FPIVPIH E P +G +DLTCDSDGK++ FI G + L LH+ E Y +G+F+ GAY+EALG +HNLFG +VV + Sbjct: 472 YYANLSIFKSIPDSWAINQIFPIVPIHRHLEEPFCKGNFADLTCDSDGKLNNFIDNGKIKSLLNLHKP-----EEDKDYLIGIFMTGAYQEALGNLHNLFGSTNVVHI 574
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PSESM (Biosynthetic arginine decarboxylase OS=Pseudomonas syringae pv. tomato GN=speA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.281e-22 Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQS 325 Y S+F S+PD WAI + PI+P+H LDE P R VL DLTCDSDGKI +++ TS+P+H + E Y LG+FL GAY+E LG +HNLFG V + Q+ Sbjct: 465 YICNFSVFQSLPDTWAIGQVLPILPLHRLDEEPVRRAVLQDLTCDSDGKIKQYVDEQSIETSMPVHSL-----NEGEDYLLGIFLVGAYQEILGDMHNLFGDTDSVNIYQN 570
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PROM9 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9312) GN=speA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.281e-22 Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 Y+ LSIF SIPD WAI +FPIVPIH E P +G +DLTCDSDGK++ FI G + L LH+ E Y +G+F+ GAY+EALG +HNLFG +VV + Sbjct: 472 YYANLSIFKSIPDSWAINQIFPIVPIHRHLEEPFCKGNFADLTCDSDGKLNNFIDDGKIKSLLNLHKP-----EEDKDYLIGIFMTGAYQEALGNLHNLFGSTNVVHI 574
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PROM5 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9515) GN=speA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.281e-22 Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 Y+ LS+F SIPD WAI +FPI+PIH E P +G +DLTCDSDGK++ FI G + L LH E Y +G+F+ GAY+EALG HNLFG +V+ + Sbjct: 472 YYANLSVFKSIPDTWAINQIFPIIPIHRHLEEPICKGNFADLTCDSDGKLNNFIDNGKIKSLLNLHRP-----EENNDYLIGIFMAGAYQEALGNFHNLFGNTNVIHI 574
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PROM2 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9215) GN=speA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.281e-22 Identity = 54/108 (50.00%), Postives = 70/108 (64.81%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 Y+ LSIF SIPD WAI +FPI+PIH E P +G +DLTCDSDGK++ FI G + L LHE + Y +G+F+ GAY+EALG +HNLFG +VV + Sbjct: 472 YYANLSIFKSIPDCWAINQIFPIMPIHRHLEEPFCKGNFADLTCDSDGKLNSFINNGKIKSLLNLHEP-----EQDKDYLIGIFMTGAYQEALGNLHNLFGNTNVVHI 574
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PROM0 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9301) GN=speA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.281e-22 Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 Y+ LSIF SIPD WAI +FPIVPIH E P +G +DLTCDSDGK++ FI G + L LHE + Y +G+F+ GAY+EALG +HNLFG +VV + Sbjct: 472 YYANLSIFKSIPDSWAINQIFPIVPIHRHLEEPFCKGNFADLTCDSDGKLNNFIDDGKIKSLLNLHEP-----EKDKDYLIGIFMTGAYQEALGNLHNLFGSTNVVHI 574
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_XANAC (Biosynthetic arginine decarboxylase OS=Xanthomonas axonopodis pv. citri GN=speA PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.592e-22 Identity = 52/109 (47.71%), Postives = 68/109 (62.39%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVL 319 Y V S+F SIPD WAI +FPIVPI L+E P RG+++D+TCDSDG + ++ +SLPLH + G Y +G FL GAY+E LG +HNLFG V V+ Sbjct: 453 YFVNFSVFESIPDVWAIDQVFPIVPIERLNEAPQRRGIIADMTCDSDGMVKTYVENESLDSSLPLHRLNAG-----ESYRIGFFLVGAYQEILGDIHNLFGDTDAVEVV 556
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PSEAE (Biosynthetic arginine decarboxylase OS=Pseudomonas aeruginosa GN=speA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.592e-22 Identity = 56/114 (49.12%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQ-SDG 331 Y S+F S+PD WAI + PI+P+H L E P R VL DLTCDSDGKI +++ TSLP+HE+ G Y +G+FL GAY+E LG +HNLFG V V Q +DG Sbjct: 465 YICNFSVFQSLPDTWAIGQVLPILPLHRLGEEPDRRAVLQDLTCDSDGKITQYVDEQSIETSLPVHEVKEG-----EDYLIGVFLVGAYQEILGDMHNLFGDTDSVNVYQRADG 573 The following BLAST results are available for this feature:
BLAST of CF832859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832859 ID=CF832859; Name=CF832859; organism=Citrus sinensis; type=EST; length=381bpback to top |