CF832859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_TOLAT (Biosynthetic arginine decarboxylase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=speA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.431e-19 Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 2 Query: 8 VTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSD 328 V S+F S+PD W I +FPI+P+ LD++P RGV+ D+TCDSDG I +++ G SLP+ EM Y+G FL GAY+E LG +HNLFG V +D Sbjct: 464 VNFSLFQSLPDAWGIDQIFPIMPLSGLDQQPTRRGVIMDITCDSDGMIKEYVDGVGIENSLPMPEMRNDETN-----YMGFFLVGAYQEILGDLHNLFGDTHSAEVCLND 568
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SHEWM (Biosynthetic arginine decarboxylase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=speA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.431e-19 Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGP-SVVRVLQSDG 331 + V S+F S+PD W I +FPI+P+ LD+ P R V+ D+TCDSDG ID+++ G T+LP+ PY +G FL GAY+E LG +HNLFG S V L DG Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPIMPLSGLDKAPERRAVMLDITCDSDGTIDQYVDGQGIETTLPV-----PAWSAESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVIRLDDDG 572
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SHEHH (Biosynthetic arginine decarboxylase OS=Shewanella halifaxensis (strain HAW-EB4) GN=speA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.431e-19 Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFG--GPSVVRV 316 + V S+F S+PD W I +FP++P+ LD+ P R V+ D+TCDSDG ID+++ G T+LP+ + PY +G FL GAY+E LG +HNLFG +VVR+ Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVMPLSGLDKAPESRAVMLDITCDSDGTIDQYVDGQGIETTLPVPAWT-----QESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVVRL 568
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SHIFL (Biosynthetic arginine decarboxylase OS=Shigella flexneri GN=speA PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.787e-19 Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 +V S+F S+PD W I LFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E P LG F+ GAY+E LG +HNLFG V V Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEY-----DPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDV 587
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SHIF8 (Biosynthetic arginine decarboxylase OS=Shigella flexneri serotype 5b (strain 8401) GN=speA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.787e-19 Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 +V S+F S+PD W I LFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E P LG F+ GAY+E LG +HNLFG V V Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEY-----DPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDV 561
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SHEPW (Biosynthetic arginine decarboxylase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=speA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.787e-19 Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFG--GPSVVRV 316 + V S+F S+PD W I +FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ + PY +G FL GAY+E LG +HNLFG +VVRV Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVMPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWT-----QESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVVRV 568
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SALTY (Biosynthetic arginine decarboxylase OS=Salmonella typhimurium GN=speA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.787e-19 Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 +V S+F S+PD W I LFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E P LG F+ GAY+E LG +HNLFG V V Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEY-----DPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDV 587
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SALTI (Biosynthetic arginine decarboxylase OS=Salmonella typhi GN=speA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.787e-19 Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 +V S+F S+PD W I LFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E P LG F+ GAY+E LG +HNLFG V V Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEY-----DPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDV 587
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SALSV (Biosynthetic arginine decarboxylase OS=Salmonella schwarzengrund (strain CVM19633) GN=speA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.787e-19 Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 +V S+F S+PD W I LFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E P LG F+ GAY+E LG +HNLFG V V Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEY-----DPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDV 561
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SALPB (Biosynthetic arginine decarboxylase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=speA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.787e-19 Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 +V S+F S+PD W I LFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E P LG F+ GAY+E LG +HNLFG V V Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEY-----DPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDV 561 The following BLAST results are available for this feature:
BLAST of CF832859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832859 ID=CF832859; Name=CF832859; organism=Citrus sinensis; type=EST; length=381bpback to top |