CF832859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_ALHEH (Biosynthetic arginine decarboxylase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=speA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.787e-19 Identity = 51/103 (49.51%), Postives = 64/103 (62.14%), Query Frame = 2 Query: 17 SIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFI---GGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 S+F S+PD WAI +FP++P+ LDE P R VL DLTCDSDG I ++ G ++LPL G PY LG+FL GAY+E LG +HNLFG V V Sbjct: 461 SLFQSMPDVWAIDQIFPVLPLQRLDEPPASRAVLQDLTCDSDGCIRGYVDRDGVESTLPLPPWRPG-----EPYLLGIFLVGAYQEILGDMHNLFGDTHSVNV 558
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SHESH (Biosynthetic arginine decarboxylase OS=Shewanella sediminis (strain HAW-EB3) GN=speA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.557e-19 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGP-SVVRVLQSDG 331 + V S+F S+PD W I +FPI+P+ LD+ P R V+ D+TCDSDG ID+++ G T++P+ PY +G FL GAY+E LG +HNLFG S V L DG Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPIMPLSGLDKAPERRAVMLDITCDSDGTIDQYVDGQGIETTIPVPTW-----SAESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVVRLDDDG 572
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SHEPA (Biosynthetic arginine decarboxylase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=speA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.557e-19 Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFG--GPSVVRV 316 + V S+F S+PD W I +FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ + PY +G FL GAY+E LG +HNLFG +VVR+ Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVMPLSGLDKAPESRAVMLDITCDSDGTVDQYVEGQGIETTLPVPAWT-----QESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVVRL 568
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PASMU (Biosynthetic arginine decarboxylase OS=Pasteurella multocida GN=speA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.557e-19 Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAV 349 +V S+F S+PD W I LFP+ PI +L++ R VL D+TCDSDG ID +I G T++P+ E P LG F+ GAY+E LG +HNLFG S V VL + ++ V Sbjct: 472 YVNFSLFQSLPDAWGIDQLFPVCPISNLNQPVSRRAVLLDITCDSDGTIDHYIDGDGITTTMPMPHY-----EEDNPPLLGFFMVGAYQEILGNMHNLFGDTSTVDVLVHEQDKAYIV 584
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SHESW (Biosynthetic arginine decarboxylase OS=Shewanella sp. (strain W3-18-1) GN=speA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.684e-18 Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFG--GPSVVRV 316 + V S+F S+PD W I +FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ PY +G FL GAY+E LG +HNLFG +VVR+ Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPV-----PAWSAESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVVRI 568
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SHEPC (Biosynthetic arginine decarboxylase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=speA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.684e-18 Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFG--GPSVVRV 316 + V S+F S+PD W I +FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ PY +G FL GAY+E LG +HNLFG +VVR+ Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPV-----PAWSAESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVVRI 568
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_HAMD5 (Biosynthetic arginine decarboxylase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=speA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.684e-18 Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 +V S+F S+PD W I LFPI+P+ L++RP R VL D+TCDSDG I+ ++ G +LP+ P LG F+ GAY+E LG +HNLFG +VV V Sbjct: 461 YVNFSLFQSLPDAWGINQLFPILPLEGLNQRPERRAVLLDITCDSDGIIEHYVDGDGVANTLPIPPY-----DAENPPILGFFMVGAYQEILGNMHNLFGDTAVVEV 562
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_YERPE (Biosynthetic arginine decarboxylase OS=Yersinia pestis GN=speA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.199e-18 Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 +V S+F S+PD W I LFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ P LG F+ GAY+E LG +HNLFG + V V Sbjct: 487 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDKPPERRAVLLDITCDSDGTIDHYIDGDGVATTMPMPPY-----DPENPPLLGFFMVGAYQEILGNMHNLFGDTAAVDV 588
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_KLEP3 (Biosynthetic arginine decarboxylase OS=Klebsiella pneumoniae (strain 342) GN=speA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.199e-18 Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 +V S+F S+PD W I LFP++P+ L++ P R VL D+TCDSDG ID ++ G T++P+ E P LG F+ GAY+E LG +HNLFG V V Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVMPLEGLNKSPERRAVLLDITCDSDGAIDHYVDGDGIATTMPMPEY-----DPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDV 561
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPE2_THECC (Arginine decarboxylase (Fragment) OS=Theobroma cacao GN=SPE2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.199e-18 Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKF 160 Y++ LS+FTSIPD W I LFPIVPIH LD+RPG RG+LSDLTCDSDGKI+KF Sbjct: 354 YNINLSVFTSIPDLWGIDQLFPIVPIHKLDQRPGARGILSDLTCDSDGKINKF 406 The following BLAST results are available for this feature:
BLAST of CF832859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832859 ID=CF832859; Name=CF832859; organism=Citrus sinensis; type=EST; length=381bpback to top |