CF832859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_MARAV (Biosynthetic arginine decarboxylase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=speA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.356e-18 Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 8 VTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 V S+F S+PD W I +FP++PI+ L+ R V+ D+TCDSDG+ID+++ G T+LPL E P +G F+ GAY+E LG +HNLFG V V Sbjct: 466 VNFSLFQSLPDVWGIDQIFPVMPINGLNRSLNRRAVIQDITCDSDGRIDQYVDGQGIETTLPLPEH-----DPESPLLMGFFMTGAYQEILGDMHNLFGDTHSVDV 566
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_SHEDO (Biosynthetic arginine decarboxylase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=speA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.861e-17 Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 2 Query: 8 VTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSD 328 V S+F S+PD W I +FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ PY +G F+ GAY+E LG +HNLFG + V D Sbjct: 466 VNFSLFQSLPDAWGIDQVFPVLPLTCLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPV-----PAWDPANPYLIGFFMVGAYQEILGDMHNLFGDTNSAVVFVED 570
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PROMH (Biosynthetic arginine decarboxylase OS=Proteus mirabilis (strain HI4320) GN=speA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.416e-17 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 ++V S+F S+PD W I LFP++PI LD+ R VL D+TCDSDG ID ++ G T++P+ P +G F+ GAY+E LG +HNLFG + V V Sbjct: 461 FYVNFSLFQSLPDAWGIDQLFPVLPIEGLDKPLDRRAVLLDITCDSDGIIDHYVDGDGVETTMPM-----PAYDPEYPPMIGFFMVGAYQEILGNMHNLFGDTAAVDV 563
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_NEIMB (Biosynthetic arginine decarboxylase OS=Neisseria meningitidis serogroup B GN=speA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.238e-17 Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVL 319 +V S+F S+PD W I LFP+ PI L+E R VL D+TCDSDG ID +I G ++P+ + E P LG F+ GAY+E LG +HNLFG + V+ Sbjct: 458 YVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDHYIDGDGIAGTMPMPDY-----PEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVV 560
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_NEIMA (Biosynthetic arginine decarboxylase OS=Neisseria meningitidis serogroup A GN=speA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.238e-17 Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 2 Query: 5 HVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVL 319 +V S+F S+PD W I LFP+ PI L+E R VL D+TCDSDG ID +I G ++P+ + E P LG F+ GAY+E LG +HNLFG + V+ Sbjct: 458 YVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDHYIDGDGIAGTMPMPDY-----PEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVV 560
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_VIBVY (Biosynthetic arginine decarboxylase OS=Vibrio vulnificus (strain YJ016) GN=speA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.576e-16 Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSD 328 + V S+F S+PD W I +FP++P+ L R V+ D+TCDSDG ID ++ G ++LP+ E PY +G FL GAY+E LG +HNLFG V V D Sbjct: 468 FFVNFSLFQSLPDSWGIDQVFPVLPLSGLQNAADRRAVMLDITCDSDGAIDAYVDGQGIESTLPV-----PAWNEDEPYLMGFFLVGAYQEILGDMHNLFGDTHSVVVNVGD 574
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_VIBVU (Biosynthetic arginine decarboxylase OS=Vibrio vulnificus GN=speA PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.576e-16 Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSD 328 + V S+F S+PD W I +FP++P+ L R V+ D+TCDSDG ID ++ G ++LP+ E PY +G FL GAY+E LG +HNLFG V V D Sbjct: 469 FFVNFSLFQSLPDSWGIDQVFPVLPLSGLQNAADRRAVMLDITCDSDGAIDAYVDGQGIESTLPV-----PAWNEDEPYLMGFFLVGAYQEILGDMHNLFGDTHSVVVNVGD 575
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_PHOLL (Biosynthetic arginine decarboxylase OS=Photorhabdus luminescens subsp. laumondii GN=speA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.058e-16 Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSD 328 ++V S+F S+PD W I LFP++PI LD+ R VL D+TCDSDG +D ++ G ++P+ C P +G F+ GAY+E LG +HNLFG + + V D Sbjct: 461 FYVNFSLFQSLPDAWGIDQLFPVLPIEGLDKPLDRRAVLLDITCDSDGIVDHYVDGDGVAATMPM-PAYDPDC----PPMIGFFMVGAYQEILGNMHNLFGDTAAIDVYVFD 567
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_VIBCH (Biosynthetic arginine decarboxylase OS=Vibrio cholerae GN=speA PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.511e-16 Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFG 295 + V S+F S+PD W I +FP++P+ L+E R V+ D+TCDSDG +++++ G ++LP+ PY +G FL GAY+E LG +HNLFG Sbjct: 468 FFVNFSLFQSLPDAWGIDQVFPVLPLSGLEEMNDRRAVMLDITCDSDGAVEQYVEGQGIESTLPVPAWTSD-----KPYLMGFFLVGAYQEILGDMHNLFG 563
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_AERS4 (Biosynthetic arginine decarboxylase OS=Aeromonas salmonicida (strain A449) GN=speA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.585e-16 Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 2 Query: 17 SIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFG 295 S+F S+PD W I +FP++P+ LD RG+L D+TCDSDG+++ ++ G ++LP+ + E Y+G FL GAY+E LG +HNLFG Sbjct: 465 SLFQSLPDAWGIGQVFPVMPLTGLDRPLSRRGILMDITCDSDGQVEHYVDGLGVESTLPMPQY-----EENEVCYVGFFLVGAYQEILGDLHNLFG 555 The following BLAST results are available for this feature:
BLAST of CF832859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832859 ID=CF832859; Name=CF832859; organism=Citrus sinensis; type=EST; length=381bpback to top |