CF832877

Overview
NameCF832877
Unique NameCF832877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4072 contig Csv1_Contig4072:288..1099. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832877 vs. ExPASy Swiss-Prot
Match: TPIS_KLULA (Triosephosphate isomerase OS=Kluyveromyces lactis GN=TPI1 PE=3 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.302e-53
Identity = 98/184 (53.26%), Postives = 131/184 (71.20%), Query Frame = -3
Query:  259 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 810
            AQN + +  GA+TGE S E + ++   WVILGHSERR   NE+++ V +K  +AL  G+KVI C+GETLE+++   T+ VV  Q +A+ EK+ +W NVV+AYEPVWAIGTG  AT   AQ++H  +R++L + +S +VA S RI+YGGS NG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:   63 AQNAYSKASGAYTGENSVEQIKDVGAEWVILGHSERRTYFNETDEIVAEKTKFALDSGVKVILCIGETLEEKQQNITLQVVQRQLQAVLEKVQDWTNVVVAYEPVWAIGTGLAATAEDAQDIHHSIREFLAEKLSRDVADSVRILYGGSANGKNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of CF832877 vs. ExPASy Swiss-Prot
Match: TPIS_KLUMA (Triosephosphate isomerase OS=Kluyveromyces marxianus GN=TPI1 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.927e-53
Identity = 97/184 (52.72%), Postives = 130/184 (70.65%), Query Frame = -3
Query:  259 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 810
            AQN +++  GAFTGE S E + ++   WVILGHSERR   +E+++F+ DK  +AL  G+KVI C+GETLE+++ G T+ VV  Q +A+ +K+ +W NVV+AYEPVWAIGTG  AT   AQ +H  +R++L   +S + A   RI+YGGS NG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:   63 AQNAYLKASGAFTGENSVEQIKDVGAEWVILGHSERRTYFHETDEFIADKTKFALDSGVKVILCIGETLEEKQKGITLEVVQRQLQAVLDKVQDWTNVVVAYEPVWAIGTGLAATSDDAQAIHHSIREFLAKKLSKDTAEKIRILYGGSANGKNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of CF832877 vs. ExPASy Swiss-Prot
Match: TPIS_DICDI (Triosephosphate isomerase OS=Dictyostelium discoideum GN=tpiA PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.698e-53
Identity = 105/191 (54.97%), Postives = 135/191 (70.68%), Query Frame = -3
Query:  244 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI-SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSATVKK 810
            +QNC+    GAFTGE+SA MLV+L IP+VI+GHSERR + +ES++ +  K  YA+S GL VI C+GE L  R+S +T  +++EQ K  A      W  +V+AYEPVWAIGTG VATP +AQ+ H  +RKW+ + VS +VA  T I+YGGSVN  NC  L+ Q D+DGFLVGGASL   +FI IIKSA  KK
Sbjct:   66 SQNCYSVAKGAFTGEISANMLVDLGIPYVIIGHSERRNVFSESSELITKKTKYAISLGLTVILCLGELLADRKSNNTEHILSEQLKDFASFTPEEWSKIVIAYEPVWAIGTGAVATPQEAQDTHVFIRKWISEKVSEDVAKKTSIMYGGSVNADNCHNLSKQSDIDGFLVGGASLVASDFIAIIKSAVPKK 256          
BLAST of CF832877 vs. ExPASy Swiss-Prot
Match: TPIS_ASHGO (Triosephosphate isomerase OS=Ashbya gossypii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.143e-52
Identity = 96/184 (52.17%), Postives = 131/184 (71.20%), Query Frame = -3
Query:  259 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 810
            AQN + +  GA+TGE S + + ++   WVILGHSERR   NE ++ V +K A+AL +G+ VI C+GETL+++++G T+ VV  Q   + EK+ +W NVV+AYEPVWAIGTG  AT   AQ++HA +R +L +  S +VA + RI++GGS NGAN      + DVDGFLVGGASLKPEF+DII S
Sbjct:   63 AQNAYTKASGAYTGENSVDQIKDVGAKWVILGHSERRTYFNEDDEQVAEKTAFALERGVSVILCIGETLDEKKAGVTLDVVKRQLTPVLEKVKDWTNVVIAYEPVWAIGTGLAATAEDAQDIHAAIRDFLAERTSRDVADAVRILFGGSANGANAASFRDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of CF832877 vs. ExPASy Swiss-Prot
Match: TPIS_YARLI (Triosephosphate isomerase OS=Yarrowia lipolytica GN=TPI1 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.492e-52
Identity = 101/183 (55.19%), Postives = 129/183 (70.49%), Query Frame = -3
Query:  259 QNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 807
            QN + +  GAFTGEVS   L ++   WVILGHSERR +  ES++++ DK  YAL  GL VI C+GET++++++G T+ VV  Q   +  KI +W NVV+AYEPVWAIGTG  AT   AQ++H E+R +LKD + A+ A   RIIYGGSVNG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:   64 QNSFDKGDGAFTGEVSVAQLKDVGAKWVILGHSERRTINKESSEWIADKTKYALDNGLDVILCIGETIDEKKAGKTLDVVRSQLDPVIAKIKDWSNVVIAYEPVWAIGTGLAATAEDAQQIHHEIRAYLKDKIGAQ-ADKVRIIYGGSVNGKNSGTFKDKSDVDGFLVGGASLKPEFVDIINS 245          
BLAST of CF832877 vs. ExPASy Swiss-Prot
Match: TPIS_CANGA (Triosephosphate isomerase OS=Candida glabrata GN=TPI1 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.814e-51
Identity = 95/183 (51.91%), Postives = 126/183 (68.85%), Query Frame = -3
Query:  259 QNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 807
            QN + +  GA+TGE S + L ++   WVILGHSERR   +E +  V +K  +AL QGL VI C+GETLE++++G T+ VV  Q  A+  ++ +W NVV+AYEPVWAIGTG  AT   AQ++H  +R +L + +  + A  TRI+YGGS NGAN      + DVDGFLVGGASLKPEF+DII S
Sbjct:   64 QNTYTKASGAYTGENSVDQLKDVGAKWVILGHSERRTYFHEDDKIVAEKTKFALDQGLGVILCIGETLEEKKAGVTLKVVERQLDAVIAEVKDWTNVVIAYEPVWAIGTGLAATAEDAQDIHHSIRSYLAEKLGKDTAEKTRILYGGSANGANAGTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of CF832877 vs. ExPASy Swiss-Prot
Match: TPI2_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.069e-50
Identity = 98/186 (52.69%), Postives = 133/186 (71.51%), Query Frame = -3
Query:  265 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN----WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 810
            AQN ++   GA+TGE S EML+++ +  VI+GHSERR ++ E+N+    K   AL +G+ VI C GETL++R++ +T+ V   Q +A+ ++I      W+NVV+AYEPVW+IGTG VATP QA+EVH  LRKW  + V AE A   RIIYGGS NG+NC++L   P++DGFLVGGASLKPEF  +I
Sbjct:   64 AQNVYLEGNGAWTGETSVEMLLDMGLSHVIIGHSERRRIMGETNEQSAKKAKRALDKGMTVIFCTGETLDERKANNTMEVNIAQLEALKKEIGESKKLWENVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPEFTTMI 249          
BLAST of CF832877 vs. ExPASy Swiss-Prot
Match: TPIS_PLAFA (Triosephosphate isomerase OS=Plasmodium falciparum GN=TPI PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.824e-50
Identity = 97/176 (55.11%), Postives = 126/176 (71.59%), Query Frame = -3
Query:  256 GAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 783
            G++TGEVSAE+  +L+I +VI+GH ERR   +E+++ V +K+  +L   LK + C GE+LEQRE   T+ V+ +Q KA  + I N+DNV+LAYEP+WAIGTGK ATP QAQ VH E+RK +KD    + A   RI+YGGSVN  NC  L  Q D+DGFLVG ASLK  F+DIIKSA
Sbjct:   72 GSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILAYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKESFVDIIKSA 247          
BLAST of CF832877 vs. ExPASy Swiss-Prot
Match: TPIS_PLAF7 (Triosephosphate isomerase OS=Plasmodium falciparum (isolate 3D7) GN=TPI PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.824e-50
Identity = 97/176 (55.11%), Postives = 126/176 (71.59%), Query Frame = -3
Query:  256 GAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 783
            G++TGEVSAE+  +L+I +VI+GH ERR   +E+++ V +K+  +L   LK + C GE+LEQRE   T+ V+ +Q KA  + I N+DNV+LAYEP+WAIGTGK ATP QAQ VH E+RK +KD    + A   RI+YGGSVN  NC  L  Q D+DGFLVG ASLK  F+DIIKSA
Sbjct:   72 GSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILAYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKESFVDIIKSA 247          
BLAST of CF832877 vs. ExPASy Swiss-Prot
Match: TPISL_HUMAN (Putative triosephosphate isomerase-like protein LOC286016 OS=Homo sapiens PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.824e-50
Identity = 101/183 (55.19%), Postives = 125/183 (68.31%), Query Frame = -3
Query:  259 QNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 807
            QNC+    GAFTGE+S  M+ +L + WV+                   KVA+AL++ L VIAC+GE L++RE+G T  VV EQTK IA+ + +W  V+LAY+PVWA GTGK ATP QAQEVH +LR WLK N+S  VA ST IIYGGSV  A CKELA+QPDV  FL+ G SLKPEF+DII +
Sbjct:   65 QNCYKVTNGAFTGEISPGMVKDLGVTWVV-------------------KVAHALAERLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVILAYDPVWATGTGKTATPQQAQEVHKKLRGWLKSNISDAVAQSTGIIYGGSVTKATCKELASQPDVAAFLMSGVSLKPEFVDIINA 228          
The following BLAST results are available for this feature:
BLAST of CF832877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_KLULA2.302e-5353.26Triosephosphate isomerase OS=Kluyveromyces lactis ... [more]
TPIS_KLUMA3.927e-5352.72Triosephosphate isomerase OS=Kluyveromyces marxian... [more]
TPIS_DICDI6.698e-5354.97Triosephosphate isomerase OS=Dictyostelium discoid... [more]
TPIS_ASHGO1.143e-5252.17Triosephosphate isomerase OS=Ashbya gossypii GN=TP... [more]
TPIS_YARLI1.492e-5255.19Triosephosphate isomerase OS=Yarrowia lipolytica G... [more]
TPIS_CANGA2.814e-5151.91Triosephosphate isomerase OS=Candida glabrata GN=T... [more]
TPI2_GIALA1.069e-5052.69Triosephosphate isomerase OS=Giardia lamblia PE=3 ... [more]
TPIS_PLAFA1.824e-5055.11Triosephosphate isomerase OS=Plasmodium falciparum... [more]
TPIS_PLAF71.824e-5055.11Triosephosphate isomerase OS=Plasmodium falciparum... [more]
TPISL_HUMAN1.824e-5055.19Putative triosephosphate isomerase-like protein LO... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02J16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02J16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832877 ID=CF832877; Name=CF832877; organism=Citrus sinensis; type=EST; length=812bp
TTTTTTTTTTTTTTTTTGCAGAAGGGAAAAGCAACCATTTATTAAATCCA
CAATGATAAGTTTCAAATCCCCACTGAAATAGGAAAGAGATTCTTAAGAA
TTCTGAAGATTTAACTTATTATACTGGAAAGGCGTTGGTAACACTTAACA
GACCACAAAAATTACAACGCTAGTTTCCAGAACGCATAACAGAGAAAACT
GCAGGCATCAGCAAGCCGAGTAGCTTGGTCTTTAACTTCAATTCTTCTTC
ACTGTGGCAGACTTGATAATATCGATGAACTCCGGCTTTAAAGAAGCTCC
ACCAACCAAAAATCCATCCACATCAGGTTGTGCTGCCAATTCTTTGCAAT
TTGCTCCATTTACAGAACCTCCGTAGATGATTCTAGTTGATGCTGCAACT
TCAGCACTGACATTGTCTTTAAGCCATTTCCTCAGTTCAGCATGGACTTC
CTGAGCCTGAGCAGGGGTTGCAACCTTCCCGGTACCAATGGCCCAAACTG
GCTCATAAGCCAACACAACATTGTCCCAGTTGGATATTTTTTCTGCGATT
GCTTTTGTTTGTTCAGCCACAACAGCCACTGTAGATCCTGATTCTCGCTG
TTCCAGAGTCTCTCCAACACAAGCAATGACTTTCAAGCCTTGAGAAAGTG
CATAAGCAACTTTATCTCCAACAAAATCATTTGACTCATTCAAAAGAGCT
CTTCTTTCAGAATGACCAAGAATGACCCAAGGAATGCTCAAGTTGACAAG
CATCTCAGCACTAACTTCCCCGGTAAAAGCACCACCTTTGCGAACCCAGC
AATTTTGAGCAG
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