CF832878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.970e-64 Identity = 124/216 (57.41%), Postives = 152/216 (70.37%), Query Frame = 3 Query: 3 TSERLKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 T E + K+VS LN A KS L V+AQN W+ KGGAFTGE+SAE LV++ WVILGHSERR ++ E ++F+G K AYALSQ LKV+AC+GE LE+RE+G T V +Q KA A+ I++W NVV+AYEPVWAIGTGKVA+P QAQEVHA +R WLK NVSA+VA++ RIIYGGSVN ANC ELA + D+DGFL Sbjct: 60 TKESISKLVSDLNAATLESDVDVVVAPPFIYIDQV--KSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAIGTGKVASPEQAQEVHAAVRDWLKTNVSADVASTVRIIYGGSVNAANCAELAKKEDIDGFL 273
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CULTA (Triosephosphate isomerase OS=Culex tarsalis GN=Tpi PE=1 SV=2) HSP 1 Score: 243.432 bits (620), Expect = 7.484e-64 Identity = 117/179 (65.36%), Postives = 145/179 (81.01%), Query Frame = 3 Query: 114 KSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 +S L VAAQNC+ GAFTGE+S ML +L+I WVILGHSERRA+ ES++ + DKVA+AL++GLKVIAC+GETL++RE+G T AV QTKAIA+K+ +W NVV+AYEPVWAIGTGK A+P QAQEVHA LRKW +NVSA+V+A+ RI YGGSV ANC+ELAA+PD+DGFL Sbjct: 51 RSQLPDSVCVAAQNCYKVPKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESDELIADKVAHALAEGLKVIACIGETLQEREAGQTEAVCFRQTKAIADKVKDWSNVVIAYEPVWAIGTGKTASPEQAQEVHAALRKWFTENVSADVSAAIRIQYGGSVTAANCRELAAKPDIDGFL 229
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_AEDTO (Triosephosphate isomerase (Fragment) OS=Aedes togoi GN=Tpi PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 9.149e-62 Identity = 115/174 (66.09%), Postives = 139/174 (79.89%), Query Frame = 3 Query: 114 KSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPD 635 +S L VAAQNC+ GAFTGE+S ML +L+I WVILGHSERRA+ ES++ + DKVA+AL++GLKVIAC+GETL++RE+G T AV QTKAIA+K+ +W NVV+AYEPVWAIGTGK ATP QAQEVH LRKW DNVSA+V+AS RI YGGSV ANC+ELAA+PD Sbjct: 33 RSQLPDSVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESDELIADKVAHALAEGLKVIACIGETLQEREAGQTEAVCFRQTKAIADKVKDWSNVVVAYEPVWAIGTGKTATPEQAQEVHVALRKWFTDNVSADVSASIRIQYGGSVTAANCRELAAKPD 206
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 9.149e-62 Identity = 118/216 (54.63%), Postives = 148/216 (68.52%), Query Frame = 3 Query: 3 TSERLKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 T + + K+VS LN A+ KS L ++ QN WV KGGAFTGE+S E L ++ WVILGHSERR ++ E + F+G K AYAL++GL VIAC+GE LE+RE+G T V EQ KA A+ + +W+N+V+AYEPVWAIGTGKVA+P QAQEVH +R+WLK NVSAEVA+ TRIIYGGSVNG N ELA + D+DGFL Sbjct: 76 TKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQV--KSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIGKKAAYALNEGLGVIACIGEKLEEREAGKTFDVCYEQLKAFADAVPSWENIVVAYEPVWAIGTGKVASPQQAQEVHVAVREWLKKNVSAEVASKTRIIYGGSVNGGNSAELAKEEDIDGFL 289
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.541e-61 Identity = 118/216 (54.63%), Postives = 145/216 (67.13%), Query Frame = 3 Query: 3 TSERLKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 T + + K++S LN A KS L ++ QN WV KGGAFTGE+S E L +L WVILGHSERR ++ E ++F+G K AYALS+GL VIAC+GE LE+RE+G T V Q KA A+ + +WDN+V+AYEPVWAIGTGKVA+P QAQEVH +R WLK NVS EVA+ TRIIYGGSVNG N ELA + D+DGFL Sbjct: 77 TKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQV--KSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFL 290
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.725e-60 Identity = 113/170 (66.47%), Postives = 133/170 (78.24%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+ALS+GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS VA STRIIYGGSV GA CKELA+QPDVDGFL Sbjct: 61 VAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFL 230
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_MACMU (Triosephosphate isomerase OS=Macaca mulatta GN=TPI1 PE=3 SV=2) HSP 1 Score: 231.491 bits (589), Expect = 2.943e-60 Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL++GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS VA STRIIYGGSV GA CKELA+QPDVDGFL Sbjct: 62 VAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSEAVAQSTRIIYGGSVTGATCKELASQPDVDGFL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_MACFA (Triosephosphate isomerase OS=Macaca fascicularis GN=TPI1 PE=2 SV=3) HSP 1 Score: 231.491 bits (589), Expect = 2.943e-60 Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL++GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS VA STRIIYGGSV GA CKELA+QPDVDGFL Sbjct: 62 VAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSEAVAQSTRIIYGGSVTGATCKELASQPDVDGFL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.844e-60 Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL++GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS VA STRIIYGGSV GA CKELA+QPDVDGFL Sbjct: 62 VAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2) HSP 1 Score: 231.106 bits (588), Expect = 3.844e-60 Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL++GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS VA STRIIYGGSV GA CKELA+QPDVDGFL Sbjct: 62 VAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFL 231 The following BLAST results are available for this feature:
BLAST of CF832878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832878 ID=CF832878; Name=CF832878; organism=Citrus sinensis; type=EST; length=650bpback to top |