CF832878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPG (Triosephosphate isomerase OS=Pseudomonas putida (strain GB-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.401e-38 Identity = 86/173 (49.71%), Postives = 114/173 (65.90%), Query Frame = 3 Query: 141 VAAQNCWVR-KGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 V AQN V+ + GA TGEV+ E LV V++GHSERR ++ E+++ + K A A ++GLK + C+GETLE+RE+G T+ VV Q +I E + + N V+AYEPVWAIGTG ATP QAQ+VHA +R L AEVAA +++YGGSV AN EL PD+DG L Sbjct: 60 VGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQVIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFANAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAE-DAEVAAKVQLLYGGSVKAANAAELFGMPDIDGGL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CARHZ (Triosephosphate isomerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tpiA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.401e-38 Identity = 89/176 (50.57%), Postives = 112/176 (63.64%), Query Frame = 3 Query: 129 SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQT-KAIAEKISNW-DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 S+ + AQN K GAFTGEVS ML ++ + +VILGHSERRA E+++ + K+ A + GL I CVGETLE+RE G T AVV Q K +A + +N+ +AYEPVWAIGTGK ATP AQEV +R+ L E+A RI YGGSV N KEL A+PD+DG L Sbjct: 57 SNIALGAQNMHFEKEGAFTGEVSPAMLQDIGVKYVILGHSERRAYFGETDELINQKIKAAFTWGLNPIFCVGETLEERERGITKAVVEIQVLKGLAGVTAEQAENLTIAYEPVWAIGTGKTATPDDAQEVCQFIRELLVKLFGREIADKVRIQYGGSVKPENIKELIAKPDIDGAL 232
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_RHOBA (Triosephosphate isomerase OS=Rhodopirellula baltica GN=tpiA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38 Identity = 86/180 (47.78%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 117 SVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 +V+ + + AQN + + GAFTGEV+A ML ++ +VILGHSERR L+ E++ V K+ AL+ L I CVGETLEQRE+ T +V+ Q + E + + N+V+AYEPVWAIGTGK A+ QA+ VHA +R+ L S EVA RI YGGSV N +EL +QP++DG L Sbjct: 54 AVVGTPVELGAQNLYAAEDGAFTGEVNASMLTDVGCRFVILGHSERRQLMGETDACVAKKLHAALAGNLVPIVCVGETLEQREADDTESVIETQIRGSLEGLDEARAANIVIAYEPVWAIGTGKTASKEQAEAVHAFIRELLGKMFSTEVAEQIRIQYGGSVKPGNAEELLSQPNIDGAL 233
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_COREF (Triosephosphate isomerase OS=Corynebacterium efficiens GN=tpiA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38 Identity = 86/170 (50.59%), Postives = 109/170 (64.12%), Query Frame = 3 Query: 147 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 AQ+ + GA+TGEVSA ML L+ WV++GHSERR NE+++ V K ALS+G+ I CVGE LE RE+G+ V V EQT+A +S N V+AYEPVWAIGTGKVA+ A AQEV +R + + EVA RI+YGGSV E+ +QPDVDG L Sbjct: 71 AQDVSQHESGAYTGEVSASMLAKLNCSWVVVGHSERREYHNETDELVAAKAKAALSKGISPIVCVGEPLEIREAGTHVDYVVEQTRASLAGLSADELANTVIAYEPVWAIGTGKVASAADAQEVCKAIRGLVTELAGEEVAEGMRILYGGSVKAETIAEIVSQPDVDGGL 240
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_THIDA (Triosephosphate isomerase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.213e-38 Identity = 93/170 (54.71%), Postives = 110/170 (64.71%), Query Frame = 3 Query: 147 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 AQN GAFTGEVSA ML++ +VI+GHSERR+L ES+ V K A + GL I CVGE+L +RESG T VVA Q A+ A I++ V+AYEPVWAIGTGK A+P QAQ VHA +R L D + A VAA I YGGSV AN EL AQPD+DG L Sbjct: 60 AQNVSEHGKGAFTGEVSASMLLDFGCKYVIVGHSERRSLYGESDALVAAKYMAAQAAGLTPILCVGESLAERESGVTEQVVARQLDAVVAAAGIASLARAVVAYEPVWAIGTGKTASPEQAQAVHAFIRGKLAD-LDAAVAAGLIIQYGGSVKAANAAELMAQPDIDGGL 228
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PARD8 (Triosephosphate isomerase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.213e-38 Identity = 85/172 (49.42%), Postives = 111/172 (64.53%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAA+NC ++ GA+TGEVSA M+ + +VILGHSERRA +E+ + + KV AL+ GL I C+GE LE+RE+G VV Q +S D ++LAYEPVWAIGTGK A+ QA+E+HA +R L EVA + I+YGGS N N KEL A+P+VDG L Sbjct: 62 VAAENCADKEKGAYTGEVSAAMVASTGAKYVILGHSERRAYYHETPEILKTKVELALANGLTPIFCIGEVLEEREAGKHFEVVDAQIAGSLFDLSAEDFGKIILAYEPVWAIGTGKTASAEQAEEIHAHIRATLAAKYGNEVADNCTILYGGSCNAGNAKELFAKPNVDGGL 233
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_KLEPN (Triosephosphate isomerase OS=Klebsiella pneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.213e-38 Identity = 85/179 (47.49%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 129 SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 S H+ AQN V GAFTGE SAEML ++ ++I+GHSERR ES++ + K A QGL + C+GET + E+G T V A Q A+ + + ++ VV+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A++A I YGGSVN N EL QPD+DG L Sbjct: 57 SHIHLGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAVFEGVVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNAGNAAELFTQPDIDGAL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_SHESH (Triosephosphate isomerase OS=Shewanella sediminis (strain HAW-EB3) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.203e-37 Identity = 85/172 (49.42%), Postives = 112/172 (65.12%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQN GA+TGEVS +ML + +VI+GHSERR + E++D V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPYIGENIRILYGGSVTPSNAADLFAQPDVDGGL 239
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_SHELP (Triosephosphate isomerase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.203e-37 Identity = 85/172 (49.42%), Postives = 112/172 (65.12%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQN GA+TGEVS +ML + +VI+GHSERR + E++D V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPYIGENIRILYGGSVTPSNAADLFAQPDVDGGL 239
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_RUTMC (Triosephosphate isomerase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.203e-37 Identity = 82/179 (45.81%), Postives = 117/179 (65.36%), Query Frame = 3 Query: 120 VLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 V+ S ++ AQN V K GAFTGE+SA+M+ + +VI+GHSERR+L E+++ V KV AL L + C+GE LE RES +T +VV++Q + + ++ I + N+++AYEPVWAIGT ATP QAQ+ HA +R L + A++A T I+YGGS+N N EL D+DG L Sbjct: 53 VVDSQLNLGAQNLNVNKLGAFTGEISADMIKDFGAKYVIVGHSERRSLYGETDEIVAQKVQVALDNNLTPLFCIGELLEDRESNNTKSVVSKQIQVVIDRVGIEAFKNIIVAYEPVWAIGTNVTATPQQAQDTHAFIRSMLAE-YDADIAQITSILYGGSMNSRNAAELLNCKDIDGGL 230 The following BLAST results are available for this feature:
BLAST of CF832878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832878 ID=CF832878; Name=CF832878; organism=Citrus sinensis; type=EST; length=650bpback to top |