CF832878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CORDI (Triosephosphate isomerase OS=Corynebacterium diphtheriae GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.203e-37 Identity = 85/170 (50.00%), Postives = 108/170 (63.53%), Query Frame = 3 Query: 147 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 AQ+ + GA+TGE+SA+ML L WV++GHSERR ES++ V K AL+QG+ I CVGE LE RE+G+ V V EQT+A ++ D V+AYEPVWAIGTGKVA+ A AQEV A +R + + EVA RI+YGGSV E+ QPDVDG L Sbjct: 68 AQDVSQHEAGAYTGEISAQMLAKLGCTWVVVGHSERREYHGESSELVAVKAKAALNQGISPIVCVGEPLEIREAGTHVEYVVEQTRASLAGLTADDLAKTVIAYEPVWAIGTGKVASAADAQEVCAAIRNLIIELAGKEVAEGLRILYGGSVKAETVAEIVGQPDVDGGL 237
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_SHEWM (Triosephosphate isomerase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 85/172 (49.42%), Postives = 112/172 (65.12%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQN GA+TGEVS +ML + +VI+GHSERR + E++D V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGL 239
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPK (Triosephosphate isomerase OS=Pseudomonas putida (strain KT2440) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 85/173 (49.13%), Postives = 114/173 (65.90%), Query Frame = 3 Query: 141 VAAQNCWVR-KGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 V AQN V+ + GA TGEV+ E LV V++GHSERR ++ E+++ + K A A ++GLK + C+GETLE+RE+G T+ VV Q +I E + + + V+AYEPVWAIGTG ATP QAQ+VHA +R L AEVAA +++YGGSV AN EL PD+DG L Sbjct: 60 VGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQIIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAE-DAEVAAKVQLLYGGSVKAANAAELFGMPDIDGGL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PSEP1 (Triosephosphate isomerase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 85/173 (49.13%), Postives = 114/173 (65.90%), Query Frame = 3 Query: 141 VAAQNCWVR-KGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 V AQN V+ + GA TGEV+ E LV V++GHSERR ++ E+++ + K A A ++GLK + C+GETLE+RE+G T+ VV Q +I E + + + V+AYEPVWAIGTG ATP QAQ+VHA +R L AEVAA +++YGGSV AN EL PD+DG L Sbjct: 60 VGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQIIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAE-DAEVAAKVQLLYGGSVKAANAAELFGMPDIDGGL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PROVI (Triosephosphate isomerase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 83/179 (46.37%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 114 KSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 +++ S+ + AQNC GAFTGEVS ML L +VI+GHSERR E++ V ++ L+ G+K I CVGETLE+RESG+ AVV+ Q + + + ++V+AYEPVWAIGTG+ A+ QAQEVH +R + + A A + RI YGGSV +N EL A PD+DG L Sbjct: 53 RTIKGSEVLLVAQNCHYEDDGAFTGEVSTGMLNALGCSYVIIGHSERRQYFGETDATVNLRIKKVLAAGMKAILCVGETLEERESGAFEAVVSTQVTGGLQGVVDISDIVIAYEPVWAIGTGRTASSEQAQEVHKIIRNKVAELYGAPAADAVRIQYGGSVKPSNAAELFAMPDIDGGL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PELPB (Triosephosphate isomerase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 83/179 (46.37%), Postives = 110/179 (61.45%), Query Frame = 3 Query: 114 KSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 K + S+ + AQNC GAFTGEVSA M++ + VI+GHSERR E+N V ++ ALS+GL VI CVGETL +RESG V++ Q + + I + +V+AYEPVWAIGTGK A+ AQA+EVH +R + + RI YGGSV +N EL A P++DG L Sbjct: 53 KVIAESEVQLVAQNCHYENDGAFTGEVSARMILAVGCSSVIIGHSERRQYFGETNATVNLRIKKALSEGLNVILCVGETLAERESGVMETVISSQVREGLDGIIDISAIVIAYEPVWAIGTGKTASSAQAEEVHLFIRTLVTGLYGQTASEKVRIQYGGSVKPSNAAELFAMPNIDGGL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_ENT38 (Triosephosphate isomerase OS=Enterobacter sp. (strain 638) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.681e-37 Identity = 86/175 (49.14%), Postives = 112/175 (64.00%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQN V GAFTGE SAEML ++ ++I+GHSERR ES++ + K A QGL + C+GET + E+G T V A Q A+ + S ++ VV+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A+VA I YGGSVN AN EL QPD+DG L Sbjct: 61 LGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDELIAKKFAVLKEQGLIPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGASAFEGVVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKVAEQVIIQYGGSVNAANAAELFTQPDIDGAL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_SHEPW (Triosephosphate isomerase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 86/180 (47.78%), Postives = 113/180 (62.78%), Query Frame = 3 Query: 144 AAQNCWVRKG---------GAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 A C VR G GA+TGE+S +ML + +VI+GHSERR + E++D V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L Sbjct: 61 ALNGCLVRMGTQNVSQHDFGAYTGEISGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGL 239
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CORGB (Triosephosphate isomerase OS=Corynebacterium glutamicum (strain R) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 85/170 (50.00%), Postives = 106/170 (62.35%), Query Frame = 3 Query: 147 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 AQ+ + GA+TGEVSA ML L+ WV++GHSERR NES++ V K ALS G+ I CVGE LE RE+G+ V V EQT+ + + N V+AYEPVWAIGTGKVA+ A AQEV +R + + EVA RI+YGGSV E+ QPDVDG L Sbjct: 68 AQDVSQHESGAYTGEVSASMLAKLNCSWVVVGHSERREYHNESDELVAAKAKAALSNGISPIVCVGEPLEIREAGTHVEYVVEQTRKSLAGLDATELANTVIAYEPVWAIGTGKVASAADAQEVCKAIRGLIVELAGDEVAEGLRILYGGSVKAETVAEIVGQPDVDGGL 237
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_BACWK (Triosephosphate isomerase OS=Bacillus weihenstephanensis (strain KBAB4) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 88/176 (50.00%), Postives = 110/176 (62.50%), Query Frame = 3 Query: 129 SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQ-TKAIAEKISNWDNV-VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 +D V AQN K GAFTGE+S L +L + +V+LGHSERR + E+++ V K A GL I C GETLE+RESG T +VA Q TKA+A V V+AYEP+WAIGTGK ++ A A EV A +RK + + VS E A + RI YGGSV N KE AQ D+DG L Sbjct: 57 TDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTLAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKVTVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGSVKPENIKEYMAQSDIDGAL 232 The following BLAST results are available for this feature:
BLAST of CF832878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832878 ID=CF832878; Name=CF832878; organism=Citrus sinensis; type=EST; length=650bpback to top |