CF832878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_SHEAM (Triosephosphate isomerase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 83/172 (48.26%), Postives = 112/172 (65.12%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E++D V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +R+ L + VS + + RI+YGGSV +N +L AQPDVDG L Sbjct: 69 MGAQNLSQHDFGAYTGEISGQMLKDSGCRYVIVGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRRRLSE-VSPFIGENVRILYGGSVTPSNAADLFAQPDVDGGL 239
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_MYXXD (Triosephosphate isomerase OS=Myxococcus xanthus (strain DK 1622) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 85/172 (49.42%), Postives = 105/172 (61.05%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 +AAQNC GAFTGE+SA ML L +VI+GHSERR L ++++ V + + G+ I CVGETL +RE+ T+AVV Q + E + VLAYEPVWAIGTG+ AT AQAQEVHA +R ++ E A RI YGGSV N EL QPDVDG L Sbjct: 66 LAAQNCHWESSGAFTGEISAPMLAELGCAYVIVGHSERRQLFGDTDEQVNKRAKAVRAAGMTPIICVGETLAEREANQTLAVVERQVRGALEGFGAKEVAGFVLAYEPVWAIGTGRNATAAQAQEVHAAIRGLVERLYDGETAGRVRIQYGGSVKPDNAAELLGQPDVDGAL 237
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CORGL (Triosephosphate isomerase OS=Corynebacterium glutamicum GN=tpiA PE=1 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 87/170 (51.18%), Postives = 108/170 (63.53%), Query Frame = 3 Query: 147 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQT-KAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 AQ+ + GA+TGEVSA ML L+ WV++GHSERR NES++ V K ALS G+ I CVGE LE RE+G+ V V EQT K++A + N V+AYEPVWAIGTGKVA+ A AQEV +R + + EVA RI+YGGSV E+ QPDVDG L Sbjct: 68 AQDVSQHESGAYTGEVSASMLAKLNCSWVVVGHSERREYHNESDELVAAKAKAALSNGISPIVCVGEPLEIREAGTHVEYVVEQTRKSLAGLDAAELANTVIAYEPVWAIGTGKVASAADAQEVCKAIRGLIVELAGDEVAEGLRILYGGSVKAETVAEIVGQPDVDGGL 237
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PSEE4 (Triosephosphate isomerase OS=Pseudomonas entomophila (strain L48) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 82/174 (47.13%), Postives = 114/174 (65.52%), Query Frame = 3 Query: 138 HVAAQNCWVR-KGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 +V AQN V+ + GA TGEV+ L + +V++GHSERR ++ ES++ + K A A GL + C+GETL +RE+G T+ VV Q ++ + I + N V+AYEPVWAIGTG A+P QAQ+VHA +RK L + AEVAA+ +++YGGSV AN EL PD+DG L Sbjct: 59 NVGAQNSAVQPEQGALTGEVAPSQLAEVGCKYVLVGHSERRQIIGESDEVLNQKFAAAQKSGLTPVLCIGETLAEREAGETLKVVGRQLSSVIDAFGIKAFANAVIAYEPVWAIGTGLTASPQQAQDVHAAIRKQLA-AMDAEVAANVQLLYGGSVKAANAAELFGMPDIDGGL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_ERWCT (Triosephosphate isomerase OS=Erwinia carotovora subsp. atroseptica GN=tpiA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 85/175 (48.57%), Postives = 110/175 (62.86%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQN V GAFTGE SAEML ++ ++I+GHSERR ES++F+ K GL + C+GET + E+G T AV A Q A+ + ++N V+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A VA I YGGSVN AN EL QPD+DG L Sbjct: 61 LGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAKKFGVLKDAGLIPVLCIGETEAENEAGQTEAVCARQLDAVLNTLGAKAFENTVVAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKQDAAVAEQVIIQYGGSVNAANAAELFTQPDIDGAL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_SHEDO (Triosephosphate isomerase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.799e-37 Identity = 83/172 (48.26%), Postives = 112/172 (65.12%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L Sbjct: 69 MGAQNVSQHDFGAYTGEISGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPFIGENVRILYGGSVTPSNAADLFAQPDVDGGL 239
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_ENTCL (Triosephosphate isomerase OS=Enterobacter cloacae GN=tpiA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.799e-37 Identity = 84/175 (48.00%), Postives = 112/175 (64.00%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQN V GAFTGE SAEML ++ ++I+GHSERR ES++F+ K A QGL + C+GET + E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A+VA I YGGSVN +N EL QPD+DG L Sbjct: 61 LGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAKKFAVLKEQGLIPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKVAEQVIIQYGGSVNASNAAELFTQPDIDGAL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_ALKOO (Triosephosphate isomerase OS=Alkaliphilus oremlandii (strain OhILAs) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.799e-37 Identity = 77/181 (42.54%), Postives = 116/181 (64.09%), Query Frame = 3 Query: 114 KSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 K+++ ++ + AQN + GA+TGE+SA ML ++ + +VILGHSERR NE+++ V KV A+ + LK I C+GE+LE+RE+ T V+ +Q E + DNVVLAYEP+WAIGTGK A+ +AQ V A +R +++ +++ RI YGGSV +N E+ + D+DG L Sbjct: 51 KALVGTNLKLGAQNMHWEEDGAYTGEISANMLKDIGVEYVILGHSERRQYFNETDETVNKKVKKAIKENLKPIVCIGESLEEREANQTFDVIKKQLLGAFEGVPAEAMDNVVLAYEPIWAIGTGKTASSEEAQTVIAYIRSLIEEKYGVDISEEVRIQYGGSVKASNATEIMNETDIDGAL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_BACHK (Triosephosphate isomerase OS=Bacillus thuringiensis subsp. konkukian GN=tpiA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.019e-36 Identity = 87/176 (49.43%), Postives = 109/176 (61.93%), Query Frame = 3 Query: 129 SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQ-TKAIAEKISNW-DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 +D V AQN K GAFTGE+S L +L + +V+LGHSERR + E+++ V K A GL I C GETLE+RESG T +VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV A +RK + + VS E A + RI YGGSV N KE AQ D+DG L Sbjct: 57 TDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGSVKPENIKEYMAQSDIDGAL 232
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_BACCZ (Triosephosphate isomerase OS=Bacillus cereus (strain ZK / E33L) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.019e-36 Identity = 87/176 (49.43%), Postives = 109/176 (61.93%), Query Frame = 3 Query: 129 SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQ-TKAIAEKISNW-DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 +D V AQN K GAFTGE+S L +L + +V+LGHSERR + E+++ V K A GL I C GETLE+RESG T +VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV A +RK + + VS E A + RI YGGSV N KE AQ D+DG L Sbjct: 57 TDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGSVKPENIKEYMAQSDIDGAL 232 The following BLAST results are available for this feature:
BLAST of CF832878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832878 ID=CF832878; Name=CF832878; organism=Citrus sinensis; type=EST; length=650bpback to top |