CF832878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2) HSP 1 Score: 231.106 bits (588), Expect = 3.844e-60 Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL++GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS VA STRIIYGGSV GA CKELA+QPDVDGFL Sbjct: 62 VAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CANFA (Triosephosphate isomerase OS=Canis familiaris GN=TPI1 PE=1 SV=3) HSP 1 Score: 231.106 bits (588), Expect = 3.844e-60 Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL++GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS VA STRIIYGGSV GA CKELA+QPDVDGFL Sbjct: 62 VAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_BOVIN (Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE=2 SV=3) HSP 1 Score: 231.106 bits (588), Expect = 3.844e-60 Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ +L WV+LGHSERR + ES++ +G KVA+AL++GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS VA S RIIYGGSV GA CKELA+QPDVDGFL Sbjct: 62 VAAQNCYKVANGAFTGEISPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSARIIYGGSVTGATCKELASQPDVDGFL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_MOUSE (Triosephosphate isomerase OS=Mus musculus GN=Tpi1 PE=1 SV=3) HSP 1 Score: 230.335 bits (586), Expect = 6.557e-60 Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ +L WV+LGHSERR + ES++ +G KV++AL++GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NV+ VA STRIIYGGSV GA CKELA+QPDVDGFL Sbjct: 62 VAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVSHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVNDGVAQSTRIIYGGSVTGATCKELASQPDVDGFL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_RAT (Triosephosphate isomerase OS=Rattus norvegicus GN=Tpi1 PE=1 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.118e-59 Identity = 113/170 (66.47%), Postives = 133/170 (78.24%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ +L WV+LGHSERR + ES++ +G KV +ALS+GL VIAC+GE L++RE+G T VV EQTKAIA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS VA TRIIYGGSV GA CKELA+QPDVDGFL Sbjct: 62 VAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHIFGESDELIGQKVNHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWCKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKCNVSEGVAQCTRIIYGGSVTGATCKELASQPDVDGFL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_GORGO (Triosephosphate isomerase OS=Gorilla gorilla gorilla GN=TPI1 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.118e-59 Identity = 111/170 (65.29%), Postives = 132/170 (77.65%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL++GL VIAC+GE L++RE+G T VV EQTK I + + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS VA STRIIYGGSV GA CKELA+QPDVDGFL Sbjct: 62 VAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVITDNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CULPI (Triosephosphate isomerase (Fragment) OS=Culex pipiens GN=Tpi PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.118e-59 Identity = 110/174 (63.22%), Postives = 137/174 (78.74%), Query Frame = 3 Query: 114 KSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPD 635 +S L VAAQNC+ GAFTGE+S ML +L+I WVILGHSERRA+ ES + + DK+ +AL++GLKVIAC+GETL++RE+ T AV QTKAIA+K+ +W NVV+AYEPVWAIGTGK ATP QAQEVHA LRKW +NVSA+V+++ RI YGGSV ANC+ELAA+PD Sbjct: 33 RSQLPDTVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESGELIADKIVHALAEGLKVIACIGETLQEREAAKTEAVCFRQTKAIADKVKDWSNVVIAYEPVWAIGTGKTATPEQAQEVHAALRKWFTENVSADVSSAIRIQYGGSVTAANCRELAAKPD 206
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_XENTR (Triosephosphate isomerase OS=Xenopus tropicalis GN=tpi1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.461e-59 Identity = 111/176 (63.07%), Postives = 134/176 (76.14%), Query Frame = 3 Query: 123 LRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 L + F V+AQNC+ GAFTGE+S M+ + WVILGHSERR + ES++ +G KVA+ALS+ + VI C+GE L+QRE+G T VV EQTKAIA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR+WLK NVS +VA S RIIYGGSV G CKEL AQPD+DGFL Sbjct: 55 LDAKFAVSAQNCYKVAKGAFTGEISPAMIKDCGATWVILGHSERRHVFGESDELIGQKVAHALSENVGVIGCIGEKLDQREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPEQAQEVHKKLREWLKTNVSEDVAKSVRIIYGGSVTGGTCKELGAQPDIDGFL 230
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CHICK (Triosephosphate isomerase OS=Gallus gallus GN=TPI1 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.461e-59 Identity = 112/170 (65.88%), Postives = 134/170 (78.82%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAAQNC+ GAFTGE+S M+ ++ WVILGHSERR + ES++ +G KVA+AL++GL VIAC+GE L++RE+G T VV EQTKAIA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK +VS VA STRIIYGGSV G NCKELA+Q DVDGFL Sbjct: 61 VAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFL 230
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_LATCH (Triosephosphate isomerase OS=Latimeria chalumnae PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 7.249e-59 Identity = 107/172 (62.21%), Postives = 135/172 (78.49%), Query Frame = 3 Query: 135 FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 F VAAQNC+ GAFTGE+S M+ + + WVILGHSERR + ES++ +G KV++ALS+GL V+AC+GE L++RE+G T VV E T+ IA+ + +W VVLAYEPVWAIGTGK A+P Q+QE+H +LRKWLK+NVS VA S RIIYGGSV GA CKELA++PDVDGFL Sbjct: 58 FGVAAQNCYKVSKGAFTGEISPAMIKDCGVTWVILGHSERRHVFGESDELIGQKVSHALSEGLGVVACIGEKLDEREAGITEGVVFEVTEVIADDVKDWSKVVLAYEPVWAIGTGKTASPQQSQELHGKLRKWLKENVSETVADSVRIIYGGSVTGATCKELASEPDVDGFL 229 The following BLAST results are available for this feature:
BLAST of CF832878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832878 ID=CF832878; Name=CF832878; organism=Citrus sinensis; type=EST; length=650bpback to top |