CF832878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_FRATH (Triosephosphate isomerase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=tpiA PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.174e-30 Identity = 72/172 (41.86%), Postives = 104/172 (60.47%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 V QN GA+TGE+SA ML ++ ++++GHSERR+L ES++ V K+ + + + C+GE+L+ R+SG V+A Q I E +S VV+AYEPVWAIGTG VA+ Q QE H +R L V +A + +I+YGGS+ N K++ + PDVDG L Sbjct: 59 VGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRKSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRSLLA-KVDERLAKNIKIVYGGSLKAENAKDILSLPDVDGGL 229
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_FRATF (Triosephosphate isomerase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=tpiA PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.174e-30 Identity = 72/172 (41.86%), Postives = 104/172 (60.47%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 V QN GA+TGE+SA ML ++ ++++GHSERR+L ES++ V K+ + + + C+GE+L+ R+SG V+A Q I E +S VV+AYEPVWAIGTG VA+ Q QE H +R L V +A + +I+YGGS+ N K++ + PDVDG L Sbjct: 59 VGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRKSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRSLLA-KVDERLAKNIKIVYGGSLKAENAKDILSLPDVDGGL 229
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_POLSQ (Triosephosphate isomerase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQ-TKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQ+ GA+TGEV A ML + +VI+GHSERR + E+++ V K AL G+ + CVGET ++R SG +V Q K ++ + ++AYEPVWAIGTGKVA+ AQ++H +R L + +VA+ I+YGGSV N EL A PD+DG L Sbjct: 66 LGAQDVSAHGAGAYTGEVGASMLKEMGCEYVIVGHSERRQMHQEADESVAAKALQALDSGMTPVICVGETADERNSGRAEEIVCSQVAKQVSVLQDRLADCLIAYEPVWAIGTGKVASAQVAQDMHRAIRMQLAE-FDEDVASHVGILYGGSVKPDNAVELFAMPDIDGGL 235
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_MYCLE (Triosephosphate isomerase OS=Mycobacterium leprae GN=tpiA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 73/161 (45.34%), Postives = 96/161 (59.63%), Query Frame = 3 Query: 174 GAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 GA+TG++S L L +V++GHSERR +E + V K A AL L I C+GE LE RE G V+ Q + +S NVV+ YEPVWAIGTG+VA+ A AQEV +RK L S +VA + R++YGGS+N N ++ AQ DVDG L Sbjct: 77 GAYTGDISGAFLAKLGCSFVLVGHSERRTYHDEGDALVAAKTAAALKNSLTPIVCIGEYLEIREVGEHVSHCQNQLRGSLAGLSPEQIGNVVIVYEPVWAIGTGRVASAADAQEVCEAIRKELGALASPQVAETVRVLYGGSLNAKNIGDIVAQQDVDGGL 237
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_BUCAP (Triosephosphate isomerase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=tpiA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 72/183 (39.34%), Postives = 105/183 (57.38%), Query Frame = 3 Query: 114 KSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK--DNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 K + + H+AAQN V GAFTGE SA M+ ++ + ++I+GHSERR L NE+N+ + K + L I C+GET +++S T ++ EQ +I + N V+AYEP+W+IGTG A P Q +H ++ ++K D VSAE + + YGGSV N QPD+DG L Sbjct: 53 KDINSINIHLAAQNIDVNLTGAFTGENSALMMKDIGVKYIIIGHSERRLLHNENNEIIAKKFCLVKNLNLVPILCIGETEAEKKSNKTEKILKEQLNSIFNSFGEKAFRNAVIAYEPIWSIGTGVSADPKNVQLIHKFIKNYIKKYDIVSAE---NLIVQYGGSVTSLNAGNFLKQPDIDGLL 232
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_BRASO (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain ORS278) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 74/170 (43.53%), Postives = 101/170 (59.41%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 V AQ+C + GA TG++SAEML + VI+GHSERRA ES+ V K A GL I CVGET +QR++G T+ ++ Q + S DN+++AYEPVWAIGTG T +++H+ +R+ L E A RI+YGGSV +N EL A +V+G L Sbjct: 65 VGAQDCHAKASGAHTGDISAEMLADAGASAVIVGHSERRADHGESDVVVHQKAEAAWRAGLVAIVCVGETQQQRDAGLTLEILRGQLTLSLPEGSRADNLIVAYEPVWAIGTGLTPTAGDVEQIHSFIRQLLIVRFK-EQGARMRILYGGSVKPSNAAELMAVANVNGAL 233
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_ANOFW (Triosephosphate isomerase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 74/172 (43.02%), Postives = 98/172 (56.98%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQN GAFTGE+S L +L + +VI+GHSERR + E+++ V KV A GL I C GETLE+RES T VV Q + E ++ VV+AYEP+WAIGTGK +T A V +R+ + + S E A + RI YGGSV N A+ +DG L Sbjct: 61 IGAQNMHFEDQGAFTGEISPVALKDLGVEYVIIGHSERREMFAETDETVNKKVLAAFKHGLVPIVCCGETLEERESNRTNEVVRVQVEKALEGLTEEQVKQVVIAYEPIWAIGTGKSSTAEDANNVCGYIRQVIANKFSQEAANAVRIQYGGSVKPENIAAFLAEEHIDGAL 232
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_ACIF2 (Triosephosphate isomerase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 73/170 (42.94%), Postives = 104/170 (61.18%), Query Frame = 3 Query: 150 QNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI---SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 QN + GA+TGE+S ML ++ +V++GHSERR + ES+ + K+ AL GL + CVGET +R G T AV+ Q +A+ + ++ N+++AYEPVWAIGTG A+P QAQ VH +R+ L SA++A ++YGGSV G N L Q D+DG L Sbjct: 64 QNLFWEASGAYTGEISGAMLRDMGCRYVLIGHSERRQIFAESDAQIVQKIKAALLSGLIPVVCVGETEAERAQGLTDAVLRRQLEAVLPLLNLEASQPNLIIAYEPVWAIGTGLSASPEQAQAVHVFIRE-LAAAYSAQLARRLLLLYGGSVKGNNAAALFDQADIDGAL 232
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJB (Triosephosphate isomerase OS=Synechococcus sp. GN=tpiA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.071e-30 Identity = 74/174 (42.53%), Postives = 101/174 (58.05%), Query Frame = 3 Query: 129 SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 SD V AQN GAFTGE+S ML L + +VI+GHSERR E+++ V ++A A GL I CVGE+ +QRE G T + + Q + I + +N+V+AYEP+WAIGTG+ +A V +R+ L + A I+YGGSV N EL AQP++DG L Sbjct: 62 SDIAVGAQNLHWEDQGAFTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESQQQREQGLTESWIVGQLDRALQGI-DLENLVIAYEPIWAIGTGQTCAAQEANRVIGLIRQHLGN-------AQLPILYGGSVKAGNIDELMAQPEIDGVL 227
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_SULNB (Triosephosphate isomerase OS=Sulfurovum sp. (strain NBC37-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.071e-30 Identity = 69/173 (39.88%), Postives = 100/173 (57.80%), Query Frame = 3 Query: 132 DFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 DF + AQN ++ K GAFTGE+ + L +I +++GHSERR +L E FV +K +Y SQG ++I C+GE LE RE+G +V ++ +S ++ +++AYEP+WAIGTG AT HA L++ ++YGGSV AN KE+ A VDG L Sbjct: 51 DFTIGAQNAYLEKNGAFTGEIGLDQLDEFAIKTILIGHSERRDILGEDQAFVAEKFSYFKSQGFEIIYCIGEALEVREAGEEAVMVHLLSQFEGIDLS-YEKMIVAYEPIWAIGTGHSATTEAIASTHAALKQHF----------DRPLLYGGSVKPANIKEITAIESVDGVL 212 The following BLAST results are available for this feature:
BLAST of CF832878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832878 ID=CF832878; Name=CF832878; organism=Citrus sinensis; type=EST; length=650bpback to top |