CF832878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPD (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tpiA PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40 Identity = 89/170 (52.35%), Postives = 106/170 (62.35%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 + AQNC GAFTGEVSA M+ VI GHSERR E+N V KV +ALS+GL+VI C GETLEQRE G T VV Q + I + N+V+AYEPVWAIGTGK AT QA+EVH +R + D E A RI YGGSV +N KEL + P++DG L Sbjct: 61 LVAQNCHFEPDGAFTGEVSASMVREAGCSAVIAGHSERRHCFGETNAIVNRKVKHALSEGLQVIMCAGETLEQREGGVTGDVVTAQVREGLLGIDDISNIVIAYEPVWAIGTGKTATSEQAEEVHLLIRNTVSDLFGEEAAGRLRIQYGGSVKPSNAKELFSMPNIDGGL 230
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PORGI (Triosephosphate isomerase OS=Porphyromonas gingivalis GN=tpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40 Identity = 88/172 (51.16%), Postives = 113/172 (65.70%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAA+NC ++ GA+TGEVSA M+ + +VI+GHSERRA +E++ + +KV ALS GL I CVGE LE+RE+G VVA Q + + D ++LAYEPVWAIGTGK AT QAQE+HA +RK + EVA I+YGGS N AN KEL ++ DVDG L Sbjct: 62 VAAENCADKESGAYTGEVSAAMVASTGARYVIIGHSERRAYYHETSPILMEKVKLALSNGLTPIFCVGEVLEEREAGKHFEVVARQVEEALFTLDQTDFAKLILAYEPVWAIGTGKTATADQAQEMHAHIRKSIAAKYGKEVANGCSILYGGSCNAANAKELFSRADVDGGL 233
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PORG3 (Triosephosphate isomerase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=tpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40 Identity = 88/172 (51.16%), Postives = 113/172 (65.70%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 VAA+NC ++ GA+TGEVSA M+ + +VI+GHSERRA +E++ + +KV ALS GL I CVGE LE+RE+G VVA Q + + D ++LAYEPVWAIGTGK AT QAQE+HA +RK + EVA I+YGGS N AN KEL ++ DVDG L Sbjct: 62 VAAENCADKESGAYTGEVSAAMVASTGARYVIIGHSERRAYYHETSPILMEKVKLALSNGLTPIFCVGEVLEEREAGKHFEVVARQVEEALFTLDQTDFAKLILAYEPVWAIGTGKTATADQAQEMHAHIRKSIAAKYGKEVANGCSILYGGSCNAANAKELFSRADVDGGL 233
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_BACTN (Triosephosphate isomerase OS=Bacteroides thetaiotaomicron GN=tpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40 Identity = 84/171 (49.12%), Postives = 113/171 (66.08%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 V A+NC + GA+TGEVSAEM+ + +VILGHSERRA E+ + +KV AL+ GL I C+GE LE+RE+ VVA Q +++ ++ ++LAYEPVWAIGTGK A+P QAQE+HA +R + D E+A +T I+YGGS +N KEL + PDVDG L Sbjct: 62 VGAENCADKASGAYTGEVSAEMVASTGAKYVILGHSERRAYYGETVAILEEKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQMESVFSLSAEDFSKIILAYEPVWAIGTGKTASPEQAQEIHAFIRSIVADKYGKEIADNTSILYGGSCKPSNAKELFSNPDVDGGL 232
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PELCD (Triosephosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tpiA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39 Identity = 84/177 (47.46%), Postives = 112/177 (63.28%), Query Frame = 3 Query: 126 RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 +SD VAAQNC+ GAFTGEVS +L + +VI+GHSERR L ES+ F+ KV + GL I C+GETLE+RE+ T V+ Q + E + + + +V+AYEPVWAIGTGK AT +QAQ+ H+ +R + D ++VA RI+YGGSV N L QPD+DG L Sbjct: 56 KSDISVAAQNCYPENQGAFTGEVSPALLKDAGCRYVIVGHSERRQLFAESDAFINRKVKAVIDAGLSAILCIGETLEEREADKTFDVLERQVRCGLEGLDAAAMEQIVVAYEPVWAIGTGKTATDSQAQQAHSFIRSLVNDIFGSKVAQQVRIVYGGSVKPGNVDGLLQQPDIDGAL 232
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPB (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain BS1) GN=tpiA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39 Identity = 86/174 (49.43%), Postives = 108/174 (62.07%), Query Frame = 3 Query: 129 SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 SD + AQNC GA+TGEVS ML +L ++I+GHSERR E+N V ++ AL G++VI C+GETLE+RE+G T A+V Q + I + NVVLAYEPVWAIGTGK ATP QA VHA +R + D A RI YGGSV +N EL P++DG L Sbjct: 58 SDICLVAQNCHYEDEGAYTGEVSVRMLDSLGCSYIIVGHSERRQYFGETNRTVNLRLKKALEGGMRVILCIGETLEEREAGVTDAIVTAQVREGLADIEDLGNVVLAYEPVWAIGTGKTATPEQADAVHASIRATISDMYGEADAEDIRIQYGGSVKPSNAVELFGMPNIDGGL 231
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_CHLAA (Triosephosphate isomerase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=tpiA PE=3 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39 Identity = 87/179 (48.60%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 120 VLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 V S + AQN + GAFTGEVS MLV++ +VI+GHSERR ES+ FV K+ AL+ GL+ I CVGE+ QR++G +V Q +A ++ NVV+AYEP+WAIGTG ATPA AQ +HA +R L + +E+AA+ RI YGGSV N EL AQPD+DG L Sbjct: 54 VADSPLGLGAQNLYPEAQGAFTGEVSPPMLVDIGCRYVIIGHSERRQYFGESDAFVNRKLRAALAHGLRPIVCVGESKPQRDAGQAEPIVTAQVRAALLEVPPDQMANVVIAYEPIWAIGTGDTATPADAQAMHAAIRATLAELYGSEIAATVRIQYGGSVKPDNIDELMAQPDIDGAL 232
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_PELPD (Triosephosphate isomerase OS=Pelobacter propionicus (strain DSM 2379) GN=tpiA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39 Identity = 89/176 (50.57%), Postives = 117/176 (66.48%), Query Frame = 3 Query: 129 SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQ-TKAIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 SD +AAQ+C+ + GAFTGEVS L + VI+GHSERR L E+++ V K A++ GL I CVGET+E+RES +T VV Q T A+A +S+ + +V+AYEPVWAIGTGK AT QAQEVH +R + ++S +A S RI+YGGSV N + L AQPD+DG L Sbjct: 57 SDIGLAAQDCFWEEQGAFTGEVSPAQLRDAGCSHVIIGHSERRQLFGETDEGVNRKARAAVAVGLTAIICVGETMEERESRATFTVVGRQVTAALAGFLSHEFSRIVIAYEPVWAIGTGKTATDQQAQEVHCYIRNLVTMSISQAIADSLRILYGGSVKPDNIRGLMAQPDIDGAL 232
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_HAHCH (Triosephosphate isomerase OS=Hahella chejuensis (strain KCTC 2396) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39 Identity = 85/178 (47.75%), Postives = 113/178 (63.48%), Query Frame = 3 Query: 117 SVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 +V S + +QNC + GA+TGEVSA+M ++ WVILGHSERRAL E+++ + KV A+ GL I CVGETL RESG V +Q A+ + D+ V+AYEPVWAIGTGK A+P AQ +H LR ++ + ++A RI+YGGSV +N KEL + PDVDG L Sbjct: 52 AVSDSMIELGSQNCSATEDGAYTGEVSAKMCADMKCSWVILGHSERRALYAENDEVIACKVKRAVESGLAPILCVGETLADRESGRAEEVTLKQLDAVFMSVQPDDSWVVAYEPVWAIGTGKTASPEDAQSMHKALRNNIRKHF-PQIADKIRILYGGSVKSSNAKELFSMPDVDGAL 228
BLAST of CF832878 vs. ExPASy Swiss-Prot
Match: TPIS_FLAJ1 (Triosephosphate isomerase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39 Identity = 82/172 (47.67%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 141 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFL 650 V+AQN +GGAFTGE+SA+ML ++ + VILGHSERRA+ +E++ + +KV AL + VI C GE L+ R+SG+ +V Q + I+ +W +VLAYEPVWAIGTG+ A+P QAQE+H +R+ ++ AE+A I+YGGSV N KE+ ++PDVDG L Sbjct: 61 VSAQNVHQAEGGAFTGEISADMLTSIGVNTVILGHSERRAIFHETDALIANKVDTALKHDMTVIFCFGEELKDRQSGNHFNIVENQLRDGVFHIAKESWSKIVLAYEPVWAIGTGETASPEQAQEMHEFIRETIRKAFGAEIADEVSILYGGSVKPENAKEIFSKPDVDGGL 232 The following BLAST results are available for this feature:
BLAST of CF832878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832878 ID=CF832878; Name=CF832878; organism=Citrus sinensis; type=EST; length=650bpback to top |