CF832891

Overview
NameCF832891
Unique NameCF832891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1030 contig Csv1_Contig1030:391..1172. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832891 vs. ExPASy Swiss-Prot
Match: H32_TETBO (Histone H3.2 (Fragment) OS=Tetrahymena borealis PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = -1 
Query:  685 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 807
            MAR KQTARKSTG +APRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARAKQTARKSTGAEAPRKQLASKAARKSAPATGGIKKPHR 41
The following BLAST results are available for this feature:
BLAST of CF832891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H32_TETBO6.951e-1385.37Histone H3.2 (Fragment) OS=Tetrahymena borealis PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02J24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02J24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832891 ID=CF832891; Name=CF832891; organism=Citrus sinensis; type=EST; length=822bp
TTTTTTTTTTTTTTTTTGGTGAAGAAACATCAATATTTTTTCTTATTATT
CAACAAAAACATTGAATCAATTTCATAAAAGAACCATAAATAACAAACTA
AACTTAGATTAGAAGCAAAATAATAGAGATGTTCAACACCACCACTATTG
TGGCAACAGGTATCCAAAAGAACACATAAAAGCCAGTCTCTTATGGCGAA
TTAAAATCCCCATCATCAACAAATAGACATTATAAAACACCACCAAAAAC
AAACCCAGATGATGACAAAAGCCATATTCTAATAACTACTGGAATCCTAC
CCCTATCTACCCCCACCAACCCCCACGTACAAATTAACACATTACAACTT
CCCCCTTCCCTTCCAGTCATTCAATTGAAGCAAGCAGCAATTACGCTTAA
GCACGCTCGCCACGGATCCTACGGGCAAGCTGTATGTCCTTGGGCATAAT
AGTGACACGCTTTGCATGAATGGCGCAGAGGTTAGTGTCCTCGAAGAGAC
CAACAAGGTAAGCCTCCGCTGCCTCCTGCAGGGCCAGTACTGCATGGCTC
TGGAAACGCAGATCAGTCTTAAAGTCCTGAGCAATTTCACGAACAAGTCT
CTGGAATGGGAGTTTCCTGATAAGCAGCTCGGTACTCTTCTGGTACTTGC
GAATTTCTCGAAGGGCGACGGTTCCAGGACGGTAACGATGAGGCTTCTTA
ACACCACCGGTGGTGGGCGCAGACTTACGGGCGGCCTTGGTAGCAAGTTG
CTTCCTAGGAGCCTTTCCTCCGGTTGACTTACGTGCAGTTTGCTTGGTAC
GGGCCATCTCTGAGTTTCTTCA
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