CF832910

Overview
NameCF832910
Unique NameCF832910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1031 contig Csv1_Contig1031:1..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832910 vs. ExPASy Swiss-Prot
Match: SGTA_BOVIN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = -1
Query:  574 AISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNK--RASLSADRLR 855
            A+ FY +AI+LN  NA Y+ NRAAAY + G++  A  DC +AI +D    KAY R G A   L  + EA+  +  AL L+P N+  +++L    LR
Sbjct:  110 AVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPSYSKAYGRMGLALSSLNKHTEAVAYYRKALELDPDNETYKSNLKVAELR 205          
BLAST of CF832910 vs. ExPASy Swiss-Prot
Match: TOM34_RAT (Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus GN=Tomm34 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = -1
Query:  607 KAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTN 858
            KAI  Y+E++  +   +  YSNRA  +L    + +AE DCT+A+ LD KNVKA+ RR  A + L  YK ++ D S  L +EP N
Sbjct:  211 KAIEKYSESLLFSSLESATYSNRALCHLVLKQYKEAEKDCTEALKLDGKNVKAFYRRAQAYKALKDYKSSLADISSLLQIEPRN 294          
BLAST of CF832910 vs. ExPASy Swiss-Prot
Match: SPAG1_HUMAN (Sperm-associated antigen 1 OS=Homo sapiens GN=SPAG1 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11
Identity = 33/102 (32.35%), Postives = 60/102 (58.82%), Query Frame = -1
Query:  568 DKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKV 873
            DK +  A+S Y+E +K+N      Y+NRA  YL+   F +A+ DC +A+ L   NVKA+ RR  A + L  Y++++ D +  ++L+P+   A +  + + ++
Sbjct:  636 DKNYKDALSKYSECLKINNKECAIYTNRALCYLKLCQFEEAKQDCDQALQLADGNVKAFYRRALAHKGLKNYQKSLIDLNKVILLDPSIIEAKMELEEVTRL 737          
BLAST of CF832910 vs. ExPASy Swiss-Prot
Match: TOM34_PONAB (Mitochondrial import receptor subunit TOM34 OS=Pongo abelii GN=TOMM34 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = -1
Query:  607 KAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTN 858
            KAI  Y+E++  +   +  YSNRA  YL    + +A  DCT+A+ LD KNVKA+ RR  A + L  YK +  D S  L +EP N
Sbjct:  211 KAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADISNLLQIEPRN 294          
BLAST of CF832910 vs. ExPASy Swiss-Prot
Match: TOM34_HUMAN (Mitochondrial import receptor subunit TOM34 OS=Homo sapiens GN=TOMM34 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = -1
Query:  607 KAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTN 858
            KAI  Y+E++  +   +  YSNRA  YL    + +A  DCT+A+ LD KNVKA+ RR  A + L  YK +  D S  L +EP N
Sbjct:  211 KAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADISNLLQIEPRN 294          
BLAST of CF832910 vs. ExPASy Swiss-Prot
Match: SGTA_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens GN=SGTA PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = -1
Query:  604 AISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNK 855
            A+ FY +AI+LN  NA Y+ NRAAAY + G++  A  DC +AI +D    KAY R G A   L  + EA+  +  AL L+P N+
Sbjct:  110 AVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNE 193          
BLAST of CF832910 vs. ExPASy Swiss-Prot
Match: SGTA_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = -1
Query:  607 AISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTN 855
            A+  Y +AI+LN  NA Y+ NRAAAY + G+++ A  DC +AI +D    KAY R G A   L  + EA+  +  AL L+P N
Sbjct:  110 AVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDN 192          
BLAST of CF832910 vs. ExPASy Swiss-Prot
Match: SGTA_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus GN=Sgta PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = -1
Query:  607 AISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTN 855
            A+  Y +AI+LN  NA Y+ NRAAAY + G+++ A  DC +AI +D    KAY R G A   L  + EA+  +  AL L+P N
Sbjct:  111 AVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDN 193          
BLAST of CF832910 vs. ExPASy Swiss-Prot
Match: SGT_DICDI (Small glutamine-rich tetratricopeptide repeat-containing protein OS=Dictyostelium discoideum GN=sgt PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.473e-11
Identity = 40/97 (41.24%), Postives = 61/97 (62.89%), Query Frame = -1
Query:  577 KAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNK--RASL-SADRL 858
            +A+S Y +AI  +  NA Y++NRAA Y    +F ++  DC +AI  +    KAY R G+A   LG + EA+E ++ A+ LEP N+  +ASL +A+RL
Sbjct:  163 EALSCYNKAILYDNTNAIYFANRAATYSALQNFEKSIEDCLEAIKRNPNYGKAYTRMGSAYTSLGKFSEAMEAYNKAIELEPNNETFKASLANAERL 259          
The following BLAST results are available for this feature:
BLAST of CF832910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
SGTA_BOVIN1.461e-1141.67Small glutamine-rich tetratricopeptide repeat-cont... [more]
TOM34_RAT1.909e-1142.86Mitochondrial import receptor subunit TOM34 OS=Rat... [more]
SPAG1_HUMAN2.493e-1132.35Sperm-associated antigen 1 OS=Homo sapiens GN=SPAG... [more]
TOM34_PONAB3.256e-1142.86Mitochondrial import receptor subunit TOM34 OS=Pon... [more]
TOM34_HUMAN3.256e-1142.86Mitochondrial import receptor subunit TOM34 OS=Hom... [more]
SGTA_HUMAN3.256e-1144.05Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTA_RAT5.553e-1143.37Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTA_MOUSE5.553e-1143.37Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGT_DICDI9.473e-1141.24Small glutamine-rich tetratricopeptide repeat-cont... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02K12_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02K12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832910 ID=CF832910; Name=CF832910; organism=Citrus sinensis; type=EST; length=882bp
TTTTTTTTTTTTTTTTTATACATGATTCAAGCTCTTGAAATTTCCAATAA
TCACCTCCATTAAATAGGAAGTTGGCTTGCAAAGCTAGCACTTTTGAAAC
AAAATAAACTTTTAAAGCATGCGAAGATATACATTCAGTTAACAGCTAAC
TGGTTGTGAAAGTCATTTAGATAAAGAGCTAAGGCTATCAAAACAAAAAC
TGATTACCGGATGAAAAGGGTAAAAGCTACACTATTTTATCATTGACCTA
CACTACCCTCTCAAAAGATAGAATTACAACTCAAATATAAATTATTTAAG
AAAAATAAACGGAAAACAAAATTGGACCGCACTCACAAATTTTCATAATA
AATCACTAATTACTGCACAGCACAAGTCAGTTCTAATCAAGGGAAAAACT
CTTCTTTTCATCGCAATGCGAAAGGGCAATAATTTTTGTGTAACTCATGA
GTCGTATGGCAATCAACTCTCAATGACTTTTCTGAGATAAAGAAATGGCT
TCACTTCAACGGATTGTAGGGCTGAATCTTCTGGAAACCTGATTACACTT
TCAATCACCTACATAAATACCTTCCTTAATCTATCAGCAGAAAGGGATGC
TCTTTTATTGGTGGGCTCCAAGACCAGTGCATATGAAAAATCTTCAATTG
CCTCCTTGTAATATCCAAGCATCTCTCTTGCTGTGCCTCTGCGCAAATAA
GCCTTCACATTCTTTTTATCAAGGTTGATTGCCTTTGTACAGTCTGCCTC
AGCTTGAAGGAAGCTGCCGGATTCCAGATATGCTGCAGCCCTGTTGCTGT
AATATGTTGCATTATTTCCATTAAGTTTGATAGCTTCCGTATAAAAGCTA
ATAGCCTTCAGCCACTGCTTATCTTTATATGC
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