CF832912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_RHIE6 (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 341 +V ++V EM ++ E+FGPV +L F E+E I AN + GL+ +FT +L R RV + LE G + +N ++ PFGG KQSG GRE S ++ + E+K V +G Sbjct: 369 TVFADVTDEMTIAREEIFGPVMSVLDFDDEDEVITRANASEFGLSGGVFTADLTRAHRVVDRLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVG 479
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 45/108 (41.67%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 +V ++ +M + E+FGPV +L ++TEEE I ANDT+ GLAA + T +L R RV LE G+ +N S P GG KQSG+GRE ++ F IK V Sbjct: 372 TVFTDCTDDMTIVREEIFGPVMAILTYETEEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSV 479
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BADH_HORVU (Betaine aldehyde dehydrogenase OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 41/108 (37.96%), Postives = 69/108 (63.89%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 ++ + V + M + EVFGPV + FKTE EA+ +ANDT+ GLA + +++L+R R+++ + G+V N + AP+GG K+SG GRE ++G++ +L +K V Sbjct: 380 TINTGVSTSMQIWREEVFGPVICVKVFKTESEAVELANDTHYGLAGGVISDDLERCERIAKVIHSGIVWKNCSQPTLVQAPWGGNKRSGFGRELGEWGLENYLSVKQV 487
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338 +V SNV +M ++ E+FGPV +L FKT +E I AN+++ GL A +FTN++ + VS A++ G V +N +PFGG K SG GRE + G+ E+ E+K V + Sbjct: 402 TVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGSK-SGNGREMGECGLREYSEVKTVTI 510
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_SINMW (Betaine aldehyde dehydrogenase OS=Sinorhizobium medicae (strain WSM419) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15 Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 341 +V ++V EM ++ E+FGPV +L F E E + AN T GL+A +FT +L R RV + LE G + +N + PFGG KQSG GRE S + + E+K V +G Sbjct: 369 TVFADVTDEMTIAREEIFGPVMCVLDFDDEAEVVARANATEFGLSAGVFTADLTRAHRVVDRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAEALKHYTELKTVYVG 479
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_PSEPK (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15 Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 +V ++ +M + E+FGPV +L ++TEEE I ANDT+ GLAA + TN++ R R+ LE G+ +N S P GG KQSG+GRE + ++ IK V Sbjct: 372 TVFTDCTDDMTIVKEEIFGPVMSILTYETEEEVIRRANDTDYGLAAGVCTNDITRAHRIIHKLEAGICWINAWGESPAEMPVGGYKQSGVGRENGVSSLAQYTRIKSV 479
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_PSEPG (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15 Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 +V ++ +M + E+FGPV +L ++TEEE I ANDT GLAA + TN++ R R+ LE G+ +N S P GG KQSG+GRE + ++ IK V Sbjct: 372 TVFTDCSDDMTIVKEEIFGPVMSILSYETEEEVIRRANDTEYGLAAGVCTNDITRAHRIIHKLEAGICWINAWGESPAEMPVGGYKQSGVGRENGVSSLAQYTRIKSV 479
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_PSEP1 (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15 Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 +V ++ +M + E+FGPV +L ++TEEE I ANDT+ GLAA + TN++ R R+ LE G+ +N S P GG KQSG+GRE + ++ IK V Sbjct: 372 TVFTDCTDDMTIVKEEIFGPVMSILTYETEEEVIRRANDTDYGLAAGVCTNDITRAHRIIHKLEAGICWINAWGESPAEMPVGGYKQSGVGRENGVSSLAQYTRIKSV 479
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_PSEE4 (Betaine aldehyde dehydrogenase OS=Pseudomonas entomophila (strain L48) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15 Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 +V ++ +M + E+FGPV +L ++TEEE I ANDT GLAA + TN++ R R+ LE G+ +N S P GG KQSG+GRE + ++ IK V Sbjct: 372 TVFTDCTDDMTIVKEEIFGPVMSILSYETEEEVIRRANDTEYGLAAGVCTNDISRAHRIIHKLEAGICWINAWGESPAEMPVGGYKQSGVGRENGVSSLAQYTRIKSV 479
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_RHILW (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=betB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.014e-15 Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 341 +V ++V +M ++ E+FGPV +L F E+E I AN + GL+ +FT +L R RV + LE G + +N ++ PFGG KQSG GRE S ++ + E+K V +G Sbjct: 369 TVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVIARANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVG 479 The following BLAST results are available for this feature:
BLAST of CF832912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 317
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832912 ID=CF832912; Name=CF832912; organism=Citrus sinensis; type=EST; length=658bpback to top |