CF832912

Overview
NameCF832912
Unique NameCF832912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ABDH_CITK8 (Gamma-aminobutyraldehyde dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=CKO_01478 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-14
Identity = 39/108 (36.11%), Postives = 64/108 (59.26%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++L+  K E  +   EVFGPV  +  F  EE+ +  ANDT  GLA+ ++T ++ R  R+S  L+YG   VN   +     P GG K+SG G++ S YG++++  I+++
Sbjct:  363 TLLAGAKQEDAIVQREVFGPVVSMTVFDDEEQVLAWANDTQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKRSGYGKDMSLYGLEDYTVIRHI 470          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: YNEI_ECOLI (Aldehyde dehydrogenase-like protein yneI OS=Escherichia coli (strain K12) GN=yneI PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +VL+NV  EM     E+FGPVA +   K  E A+ +AND+  GL+A IFT +  +  +++  LE G V +N    S     FGGVK+SG GRE S +G+ EF  I+ V
Sbjct:  350 TVLANVTPEMTAFREEMFGPVAAITIAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: LADH_META3 (Lactaldehyde dehydrogenase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1030 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14
Identity = 40/111 (36.04%), Postives = 66/111 (59.46%), Query Frame = 3
Query:    3 IASVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            I   +  + ++ +++  E+F PV P++      EA++ AN++N GL + +FT ++ +    ++ LEYG V +N       +  PFGG+K SGLGREG KY +DE  EIK +
Sbjct:  350 IYPTILEITADNILANIEIFAPVLPIIRVNDMNEALNQANNSNYGLHSGVFTQDINKALYFADNLEYGGVLINNSPTFRIDNMPFGGIKHSGLGREGIKYAIDEMSEIKTI 460          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_SHIF8 (Betaine aldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=betB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V ++ + EM +   E+FGPV  LL +++E+E I  ANDT+ GLAA I T +L R  RV   LE G+  +N    S    P GG K SG+GRE     +  + ++K +
Sbjct:  372 TVFTDCRDEMTIVREEIFGPVMSLLTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVMHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_RHIL3 (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=betB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14
Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 341
            +V ++V  +M ++  E+FGPV  +L F  E+E I  AN +  GL+  +FT +L R  RV + LE G + +N   +     PFGG KQSG GRE S   ++ + E+K V +G
Sbjct:  369 TVFADVTDDMTIAREEIFGPVMCVLDFDAEDEVIARANASEFGLSGGVFTADLTRAHRVVDRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVG 479          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_PSEU2 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=betB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V ++   EM +   E+FGPV  +L + TE+E +  ANDT+ GLAA I T +L R  RV   LE G+  +N    S    P GG KQSG+GRE     + ++  IK V
Sbjct:  372 TVFTDCTDEMTIVREEIFGPVMSILGYDTEDEVVRRANDTDFGLAAGIVTRDLNRAHRVIHLLEAGICWINAWGESAAQMPVGGYKQSGVGRENGISSLAQYTRIKSV 479          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338
            +V   V+ +M ++  E+FGPV PL  FK  EE I  A++T  GLAA +FT +L +    ++AL+ G V VN   + T   P GG K+ G GRE  + G+  + E+K V +
Sbjct:  395 TVFGGVQDDMRIAREEIFGPVQPLFKFKKIEEVIERADNTRYGLAAAVFTQDLDKAMYFTQALQTGTVWVNTYNVVTCHTPLGGFKEPGNGRELGEDGLKAYTEVKTVTI 504          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ABDH_SALAR (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ydcW PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14
Identity = 37/110 (33.64%), Postives = 66/110 (60.00%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338
            ++L++ K E  +   EVFGPV  +  F  EE+ +  AN++  GLA+ ++T ++ R  R+S  L+YG   VN   +     P GG KQSG G++ S YG++++  ++++ +
Sbjct:  363 TLLADAKQEDAIVQREVFGPVVSITAFDDEEQVLRWANESRYGLASSVWTQDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTLVRHIMI 472          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_PSEMY (Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V ++ + +M +   E+FGPV  +L + +EEE I  ANDT+ GLAA + T +L R  RV   LE G+  +N    S    P GG KQSG+GRE     +  +  IK V
Sbjct:  372 TVFTDCRDDMTIVREEIFGPVMSILIYDSEEEVIRRANDTDYGLAAGVVTRDLNRAHRVIHKLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLVTLGHYTRIKSV 479          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_ECOSE (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V ++ + EM +   E+FGPV  LL +++E+E I  ANDT+ GLAA I T +L R  RV   LE G+  +N    S    P GG K SG+GRE     +  + ++K +
Sbjct:  372 TVFTDCRDEMTIVREEIFGPVMSLLTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
The following BLAST results are available for this feature:
BLAST of CF832912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
ABDH_CITK81.117e-1436.11Gamma-aminobutyraldehyde dehydrogenase OS=Citrobac... [more]
YNEI_ECOLI1.459e-1442.59Aldehyde dehydrogenase-like protein yneI OS=Escher... [more]
LADH_META31.459e-1436.04Lactaldehyde dehydrogenase OS=Methanococcus aeolic... [more]
BETB_SHIF81.459e-1438.89Betaine aldehyde dehydrogenase OS=Shigella flexner... [more]
BETB_RHIL31.459e-1438.74Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
BETB_PSEU21.459e-1440.74Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
AL1B1_BOVIN1.459e-1439.09Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
ABDH_SALAR1.459e-1433.64Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
BETB_PSEMY1.905e-1439.81Betaine aldehyde dehydrogenase OS=Pseudomonas mend... [more]
BETB_ECOSE1.905e-1438.89Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02K13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832912 ID=CF832912; Name=CF832912; organism=Citrus sinensis; type=EST; length=658bp
TTATAGCCTCAGTCCTTAGCAATGTCAAGAGTGAGATGCTTGTTTCGACA
TAGGAAGTATTCGGACCTGTGGCCCCACTTCTATGCTTCAAAACTGAGGA
GGAAGCTATCCATATGGCCAATGATACCAATGCAGGGTTAGCTGCTTATA
TATTTACAAACAATCTTCAACGTACATGGCGTGTCTCTGAAGCTCTAGAA
TATGGACTCGTTGGTGTTAATGAAGGATTAATTTCAACAGAGGTGGCTCC
TTTTGGTGGTGTTAAACAATCTGGTCTTGGACGGGAAGGTTCAAAGTATG
GGATGGATGAATTCCTGGAAATAAAATATGTGTGCTTGGGAGACATGAAC
AGAAAATGATGGGCCAGTTTTGTACCTGTATGTTACCGGGCTTATGGAGA
AGAAGGAAGGAGCCTTTAGTACTGCCTTTGAACTGTATTTTGAAGACGGA
TTGGAATAGTGTGAGCCTCAAGCGTTTGATGTGGAGGTAGTAGTGAGCCA
TAGTTGGTTTGCTATTGATACCCCATGTACATAAATAAGTTTGCAAAATG
GAACTTGAATGTCTAGTAGTGAGCCATAGGTGGTTTGCTATTGATACCCC
ATGTACATAAATAAGTTTGCAAAATGGAACTTGAATGTCTGGTGTCAAAA
AAAAAAAA
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