CF832912

Overview
NameCF832912
Unique NameCF832912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_ECOLU (Betaine aldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 3 
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V ++ + EM +   E+FGPV  LL +++E+E I  ANDT+ GLAA I T +L R  RV   LE G+  +N    S    P GG K SG+GRE     +  + ++K +
Sbjct:  372 TVFTDCRDEMTIVREEIFGPVMSLLTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479
[Close]
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_BURP6 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 3 
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V  + + +M +   E+FGPV  +L F+TE+EAI  AN T+ GLAA + T NL R  R    LE G+  +N    S    P GG KQSG+GRE     ++ +  IK V
Sbjct:  371 TVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
[Close]
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 3 
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V  + + +M +   E+FGPV  +L F+TE+EAI  AN T+ GLAA + T NL R  R    LE G+  +N    S    P GG KQSG+GRE     ++ +  IK V
Sbjct:  371 TVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
[Close]
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 3 
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V  + + +M +   E+FGPV  +L F+TE+EAI  AN T+ GLAA + T NL R  R    LE G+  +N    S    P GG KQSG+GRE     ++ +  IK V
Sbjct:  371 TVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
[Close]
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_BURMS (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 3 
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V  + + +M +   E+FGPV  +L F+TE+EAI  AN T+ GLAA + T NL R  R    LE G+  +N    S    P GG KQSG+GRE     ++ +  IK V
Sbjct:  371 TVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
[Close]
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_BURMA (Betaine aldehyde dehydrogenase OS=Burkholderia mallei GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 3 
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V  + + +M +   E+FGPV  +L F+TE+EAI  AN T+ GLAA + T NL R  R    LE G+  +N    S    P GG KQSG+GRE     ++ +  IK V
Sbjct:  371 TVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
[Close]
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_BURM9 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 3 
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V  + + +M +   E+FGPV  +L F+TE+EAI  AN T+ GLAA + T NL R  R    LE G+  +N    S    P GG KQSG+GRE     ++ +  IK V
Sbjct:  371 TVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
[Close]
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_BURM7 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10247) GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 3 
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V  + + +M +   E+FGPV  +L F+TE+EAI  AN T+ GLAA + T NL R  R    LE G+  +N    S    P GG KQSG+GRE     ++ +  IK V
Sbjct:  371 TVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
[Close]
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 3 
Query:    3 IASVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK--YVCLGD 344
            + +V S+   +M +   E+FGPV  +L ++TEEE I  ANDT  GLAA + T ++ R  R+   +E G+  +N    S    P GG KQSG+GRE     +  +  IK   V LGD
Sbjct:  370 LPTVFSDCTDQMAIVQEEIFGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLGHYTRIKSIQVELGD 485
[Close]
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 3 
Query:    3 IASVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK--YVCLGD 344
            + +V S+   +M +   E+FGPV  +L ++TEEE I  ANDT  GLAA + T ++ R  R+   +E G+  +N    S    P GG KQSG+GRE     +  +  IK   V LGD
Sbjct:  370 LPTVFSDCTDQMAIVQEEIFGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLGHYTRIKSIQVELGD 485
The following BLAST results are available for this feature:
BLAST of CF832912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
BETB_ECOLU1.905e-1438.89Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_BURP61.905e-1440.74Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP11.905e-1440.74Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP01.905e-1440.74Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURMS1.905e-1440.74Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURMA1.905e-1440.74Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM91.905e-1440.74Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM71.905e-1440.74Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_ACIBY1.905e-1438.79Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBT1.905e-1438.79Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02K13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832912 ID=CF832912; Name=CF832912; organism=Citrus sinensis; type=EST; length=658bp
TTATAGCCTCAGTCCTTAGCAATGTCAAGAGTGAGATGCTTGTTTCGACA
TAGGAAGTATTCGGACCTGTGGCCCCACTTCTATGCTTCAAAACTGAGGA
GGAAGCTATCCATATGGCCAATGATACCAATGCAGGGTTAGCTGCTTATA
TATTTACAAACAATCTTCAACGTACATGGCGTGTCTCTGAAGCTCTAGAA
TATGGACTCGTTGGTGTTAATGAAGGATTAATTTCAACAGAGGTGGCTCC
TTTTGGTGGTGTTAAACAATCTGGTCTTGGACGGGAAGGTTCAAAGTATG
GGATGGATGAATTCCTGGAAATAAAATATGTGTGCTTGGGAGACATGAAC
AGAAAATGATGGGCCAGTTTTGTACCTGTATGTTACCGGGCTTATGGAGA
AGAAGGAAGGAGCCTTTAGTACTGCCTTTGAACTGTATTTTGAAGACGGA
TTGGAATAGTGTGAGCCTCAAGCGTTTGATGTGGAGGTAGTAGTGAGCCA
TAGTTGGTTTGCTATTGATACCCCATGTACATAAATAAGTTTGCAAAATG
GAACTTGAATGTCTAGTAGTGAGCCATAGGTGGTTTGCTATTGATACCCC
ATGTACATAAATAAGTTTGCAAAATGGAACTTGAATGTCTGGTGTCAAAA
AAAAAAAA
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