CF832912

Overview
NameCF832912
Unique NameCF832912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BADH_BETVU (Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.845e-18
Identity = 48/118 (40.68%), Postives = 77/118 (65.25%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK*W 362
            +++S++ + M +   EVFGPV  +  F +E+EA+ +ANDT  GLA+ +F+ +L+R  RVS+ LE G V VN        AP+GG+K+SG GRE  ++G++ +L IK V   D++ + W
Sbjct:  378 TIISDISTSMQIWREEVFGPVLCVKTFSSEDEALELANDTEYGLASAVFSKDLERCERVSKLLESGAVWVNCSQPCFVHAPWGGIKRSGFGRELGEWGIENYLNIKQV-TSDISNEPW 494          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALDH_ENCBU (Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN=ALDH PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.845e-18
Identity = 50/108 (46.30%), Postives = 66/108 (61.11%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V ++V S M V+  E+FGPV  +  FK  +E I  ANDT+ GLAA +FT N+    +V+ +LE G V VN        APFGG K SG GRE   YG++ FLE+K V
Sbjct:  382 TVFTDVTSSMRVAKEEIFGPVQLIFKFKDVDEVIERANDTSYGLAAAVFTKNIDTALKVANSLEAGTVWVNTYNHFAFQAPFGGYKMSGQGREFGHYGLEAFLEVKTV 489          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALD1_STAHJ (Putative aldehyde dehydrogenase SH0913 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0913 PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.845e-18
Identity = 43/108 (39.81%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++  NV ++M ++  E+FGPVA ++ +   +EAI +ANDT  GLA Y+   + +   +V+ ++E G + +NE     ++ PFGG KQSG+GRE   YG++EFLE+K +
Sbjct:  364 TIFINVDNDMTIAQEEIFGPVASVITYNNLDEAIKIANDTKYGLAGYVIGKDKETLQKVARSIEAGRIEINEAGNQPDL-PFGGYKQSGIGREWGDYGIEEFLEVKSI 470          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL8A1_HUMAN (Aldehyde dehydrogenase family 8 member A1 OS=Homo sapiens GN=ALDH8A1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.845e-18
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 3
Query:    3 IASVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            + +V++++K E    T E+FGPV  ++ F +EEE I  AN+   GLAA ++++N+ R  RV++ L+ GLV  N  LI     PFGG+K SG+GREG+K   D F EIK +
Sbjct:  374 LPTVITDIKDESCCMTEEIFGPVTCVVPFDSEEEVIERANNVKYGLAATVWSSNVGRVHRVAKKLQSGLVWTNCWLIRELNLPFGGMKSSGIGREGAKDSYDFFTEIKTI 483          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V ++V S+M ++  E+FGPV  +  FK E EAI + N T+ GLAA + T N+    RVS AL+ G V +N   + +  APFGG KQSGLGRE   Y ++ + +IK V
Sbjct:  380 TVFTDVTSDMKIAQEEIFGPVVTIQKFKDEAEAIKIGNSTDYGLAAAVHTKNVNTAIRVSNALKAGTVWINNYNMISYQAPFGGFKQSGLGRELGSYALENYTQIKTV 487          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALD1_STAAW (Putative aldehyde dehydrogenase MW2046 OS=Staphylococcus aureus (strain MW2) GN=MW2046 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++  NV ++M ++  E+FGPV  ++ +   +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  364 TIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALD1_STAAS (Putative aldehyde dehydrogenase SAS2025 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2025 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++  NV ++M ++  E+FGPV  ++ +   +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  364 TIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALD1_STAAR (Putative aldehyde dehydrogenase SAR2210 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2210 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++  NV ++M ++  E+FGPV  ++ +   +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  364 TIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALD1_STAAN (Putative aldehyde dehydrogenase SA1924 OS=Staphylococcus aureus (strain N315) GN=SA1924 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++  NV ++M ++  E+FGPV  ++ +   +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  364 TIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALD1_STAAM (Putative aldehyde dehydrogenase SAV2122 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2122 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++  NV ++M ++  E+FGPV  ++ +   +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  364 TIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
The following BLAST results are available for this feature:
BLAST of CF832912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
BADH_BETVU4.845e-1840.68Betaine aldehyde dehydrogenase, chloroplastic OS=B... [more]
ALDH_ENCBU4.845e-1846.30Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN... [more]
ALD1_STAHJ4.845e-1839.81Putative aldehyde dehydrogenase SH0913 OS=Staphylo... [more]
AL8A1_HUMAN4.845e-1843.64Aldehyde dehydrogenase family 8 member A1 OS=Homo ... [more]
ALDH_EMENI6.328e-1844.44Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
ALD1_STAAW6.328e-1840.74Putative aldehyde dehydrogenase MW2046 OS=Staphylo... [more]
ALD1_STAAS6.328e-1840.74Putative aldehyde dehydrogenase SAS2025 OS=Staphyl... [more]
ALD1_STAAR6.328e-1840.74Putative aldehyde dehydrogenase SAR2210 OS=Staphyl... [more]
ALD1_STAAN6.328e-1840.74Putative aldehyde dehydrogenase SA1924 OS=Staphylo... [more]
ALD1_STAAM6.328e-1840.74Putative aldehyde dehydrogenase SAV2122 OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02K13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832912 ID=CF832912; Name=CF832912; organism=Citrus sinensis; type=EST; length=658bp
TTATAGCCTCAGTCCTTAGCAATGTCAAGAGTGAGATGCTTGTTTCGACA
TAGGAAGTATTCGGACCTGTGGCCCCACTTCTATGCTTCAAAACTGAGGA
GGAAGCTATCCATATGGCCAATGATACCAATGCAGGGTTAGCTGCTTATA
TATTTACAAACAATCTTCAACGTACATGGCGTGTCTCTGAAGCTCTAGAA
TATGGACTCGTTGGTGTTAATGAAGGATTAATTTCAACAGAGGTGGCTCC
TTTTGGTGGTGTTAAACAATCTGGTCTTGGACGGGAAGGTTCAAAGTATG
GGATGGATGAATTCCTGGAAATAAAATATGTGTGCTTGGGAGACATGAAC
AGAAAATGATGGGCCAGTTTTGTACCTGTATGTTACCGGGCTTATGGAGA
AGAAGGAAGGAGCCTTTAGTACTGCCTTTGAACTGTATTTTGAAGACGGA
TTGGAATAGTGTGAGCCTCAAGCGTTTGATGTGGAGGTAGTAGTGAGCCA
TAGTTGGTTTGCTATTGATACCCCATGTACATAAATAAGTTTGCAAAATG
GAACTTGAATGTCTAGTAGTGAGCCATAGGTGGTTTGCTATTGATACCCC
ATGTACATAAATAAGTTTGCAAAATGGAACTTGAATGTCTGGTGTCAAAA
AAAAAAAA
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