CF832912

Overview
NameCF832912
Unique NameCF832912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALD1_STAAC (Putative aldehyde dehydrogenase SACOL2114 OS=Staphylococcus aureus (strain COL) GN=SACOL2114 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++  NV ++M ++  E+FGPV  ++ +   +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  364 TIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALD1_STAAB (Putative aldehyde dehydrogenase SAB2006c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB2006c PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++  NV ++M ++  E+FGPV  ++ +   +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  364 TIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALD1_STAA8 (Putative aldehyde dehydrogenase SAOUHSC_02363 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02363 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++  NV ++M ++  E+FGPV  ++ +   +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  364 TIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALD1_STAA3 (Putative aldehyde dehydrogenase SAUSA300_2076 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2076 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            ++  NV ++M ++  E+FGPV  ++ +   +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  364 TIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL9A1_BOVIN (4-trimethylaminobutyraldehyde dehydrogenase OS=Bos taurus GN=ALDH9A1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.264e-18
Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 3
Query:   12 VLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDM 347
            VL+N + +M     E+FGPV  +L F TE E +  ANDT  GLAA +FT ++QR  RV   L+ G+  +N   +S    PFGG K+SG GRE  +  ++ + ++K VC  +GD+
Sbjct:  377 VLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEMGDV 490          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL2B7_ARATH (Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.079e-17
Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V S+VK +ML++T E+FGPV  +L FK  +E I  AN++  GLAA +FT NL    R+  AL  G V +N   +     PFGG K SG+GRE   Y ++ +L++K V
Sbjct:  417 TVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAV 524          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.079e-17
Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338
            +V S+V   M ++  E+FGPV P+L FK  EE I  AN T+ GL A +FT NL +  +++ ALE G V VN        APFGG K SG GRE  +Y + E+ E+K V +
Sbjct:  396 TVFSDVTDNMRIAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWVNCYNAFYAQAPFGGFKMSGNGRELGEYALAEYTEVKTVTI 505          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 90.1225 bits (222), Expect = 1.079e-17
Identity = 47/110 (42.73%), Postives = 71/110 (64.55%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338
            +V SNV  EM ++  E+FGPV  ++ FK+ ++ I  AN+T  GLAA +FT +L +   VS AL+ G+V VN  ++ +   PFGG K SG GRE  ++G+ E+ E+K V +
Sbjct:  385 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAM 494          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: LADH_METVS (Lactaldehyde dehydrogenase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0796 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.410e-17
Identity = 46/116 (39.66%), Postives = 73/116 (62.93%), Query Frame = 3
Query:    3 IASVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 347
            I+  + N+  + ++S  E FGP+ P+L  K +E A+++AN++  GL A IFTN++ +  + +  LEYG V VN       +  PFGG+K+SGLG+EG KY ++E  E K V + +M
Sbjct:  350 ISPAVLNIDEDNILSKVEAFGPILPILKAKDDEHALNIANNSKYGLQAGIFTNDINKAMKFANKLEYGGVIVNGSPTFRKDNMPFGGIKKSGLGKEGIKYAVEEMCETKTVVIHNM 465          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL9A1_RAT (4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.410e-17
Identity = 46/114 (40.35%), Postives = 69/114 (60.53%), Query Frame = 3
Query:   12 VLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDM 347
            +L+N   +M     E+FGPV  +L F+TE E +  ANDT  GLAA +FT ++QR  RV+  L+ G   +N   +S    PFGG K+SG GRE  +  ++ + ++K VC  +GD+
Sbjct:  377 ILTNCTDDMTCVKEEIFGPVMSILTFETEAEVLERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEMGDV 490          
The following BLAST results are available for this feature:
BLAST of CF832912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
ALD1_STAAC6.328e-1840.74Putative aldehyde dehydrogenase SACOL2114 OS=Staph... [more]
ALD1_STAAB6.328e-1840.74Putative aldehyde dehydrogenase SAB2006c OS=Staphy... [more]
ALD1_STAA86.328e-1840.74Putative aldehyde dehydrogenase SAOUHSC_02363 OS=S... [more]
ALD1_STAA36.328e-1840.74Putative aldehyde dehydrogenase SAUSA300_2076 OS=S... [more]
AL9A1_BOVIN8.264e-1841.234-trimethylaminobutyraldehyde dehydrogenase OS=Bos... [more]
AL2B7_ARATH1.079e-1743.52Aldehyde dehydrogenase family 2 member B7, mitocho... [more]
AL1A3_RAT1.079e-1744.55Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
AL1A1_MOUSE1.079e-1742.73Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]
LADH_METVS1.410e-1739.66Lactaldehyde dehydrogenase OS=Methanococcus vannie... [more]
AL9A1_RAT1.410e-1740.354-trimethylaminobutyraldehyde dehydrogenase OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02K13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832912 ID=CF832912; Name=CF832912; organism=Citrus sinensis; type=EST; length=658bp
TTATAGCCTCAGTCCTTAGCAATGTCAAGAGTGAGATGCTTGTTTCGACA
TAGGAAGTATTCGGACCTGTGGCCCCACTTCTATGCTTCAAAACTGAGGA
GGAAGCTATCCATATGGCCAATGATACCAATGCAGGGTTAGCTGCTTATA
TATTTACAAACAATCTTCAACGTACATGGCGTGTCTCTGAAGCTCTAGAA
TATGGACTCGTTGGTGTTAATGAAGGATTAATTTCAACAGAGGTGGCTCC
TTTTGGTGGTGTTAAACAATCTGGTCTTGGACGGGAAGGTTCAAAGTATG
GGATGGATGAATTCCTGGAAATAAAATATGTGTGCTTGGGAGACATGAAC
AGAAAATGATGGGCCAGTTTTGTACCTGTATGTTACCGGGCTTATGGAGA
AGAAGGAAGGAGCCTTTAGTACTGCCTTTGAACTGTATTTTGAAGACGGA
TTGGAATAGTGTGAGCCTCAAGCGTTTGATGTGGAGGTAGTAGTGAGCCA
TAGTTGGTTTGCTATTGATACCCCATGTACATAAATAAGTTTGCAAAATG
GAACTTGAATGTCTAGTAGTGAGCCATAGGTGGTTTGCTATTGATACCCC
ATGTACATAAATAAGTTTGCAAAATGGAACTTGAATGTCTGGTGTCAAAA
AAAAAAAA
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