CF832912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL1A2_RAT (Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17 Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 +V SNV +M ++ E+FGPV +L FKT +E I AN+++ GL A +FTN++ + VS A++ G V +N +PFGG K SG GRE ++G+ E+ E+K V Sbjct: 402 TVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTV 509
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17 Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 +V SNV +M ++ E+FGPV +L FKT +E I AN+++ GL A +FTN++ + VS A++ G V +N +PFGG K SG GRE ++G+ E+ E+K V Sbjct: 402 TVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTV 509
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL1A2_HUMAN (Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17 Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 +V SNV +M ++ E+FGPV +L FKT +E I AN+++ GL A +FTN++ + VS A++ G V +N +PFGG K SG GRE ++G+ E+ E+K V Sbjct: 402 TVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTV 509
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17 Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338 +V SNV +M ++ E+FGPV ++ FKT +E I AN+T GLAA +FT ++ + + AL+ G V VN + PFGG K SG GRE +YG+ E+ E+K V + Sbjct: 393 TVFSNVTDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTVTI 502
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.102e-17 Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 ++ SN S+M + EVFGPV + F +EEE I +ANDT GLA +++ ++++ RV+ L G V +N+ AP+GG KQSG GRE K G++E+ E+K+V Sbjct: 369 TIFSNCNSDMRIVQEEVFGPVLTVETFSSEEEVIELANDTIYGLAGAVWSKDIEKCERVAARLRMGTVWINDFHPYFAQAPWGGYKQSGFGRELGKIGLEEYTEVKHV 476
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.102e-17 Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338 +V SNV +M ++ E+FGPV ++ FK+ +E I AN+T GL A +FT +L + VS AL+ G V VN L ++ +P GG K SG GRE +YG+ E+ E+K V + Sbjct: 385 TVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTVTM 494
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_RHOSK (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=betB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17 Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 341 +V ++V M ++ EVFGPV +L F+TEEEAI AN T+ GLAA +FT +L R RV L+ G +N ++ APFGGVK SG+GRE + ++ + ++K V +G Sbjct: 365 TVFADVTDAMTLACEEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSVYVG 475
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_RHOS1 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=betB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17 Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 341 +V ++V M ++ EVFGPV +L F+TEEEAI AN T+ GLAA +FT +L R RV L+ G +N ++ APFGGVK SG+GRE + ++ + ++K V +G Sbjct: 365 TVFADVTDAMTLAREEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSVYVG 475
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17 Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338 ++ SNV +M ++ E+FGPV ++ FK+ +E I AN+T GL A +FT +L + VS AL+ G V VN L ++ +P GG K SG GRE +YG+ E+ E+K V + Sbjct: 385 TIFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTVTM 494
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17 Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 3 Query: 9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332 +V +VK M ++ E+FGPV +L FKT EE + AND+ GLAA +FT +L + +S+AL+ G V +N + +PFGG K SG GRE +YG+ + E+K V Sbjct: 403 TVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 510 The following BLAST results are available for this feature:
BLAST of CF832912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 317
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832912 ID=CF832912; Name=CF832912; organism=Citrus sinensis; type=EST; length=658bpback to top |