CF832912

Overview
NameCF832912
Unique NameCF832912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.535e-16
Identity = 45/108 (41.67%), Postives = 67/108 (62.04%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V  +V+  M ++  E+FGPV  +L FKT EE +  AN++  GLAA +FT +L +   +S+AL+ G V VN   +    +PFGG K SG GRE  +YG+  + E+K V
Sbjct:  401 TVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYNVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 508          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.923e-16
Identity = 45/108 (41.67%), Postives = 67/108 (62.04%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V  +V+  M ++  E+FGPV  +L FKT EE +  AN++  GLAA +FT +L +   +S+AL+ G V VN   +    +PFGG K SG GRE  +YG+  + E+K V
Sbjct:  401 TVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 508          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL9A1_ORYLA (Aldehyde dehydrogenase family 9 member A1 OS=Oryzias latipes GN=aldh9A1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.923e-16
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 3
Query:   12 VLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +L N + +M     E+FGPV  +L F TEEE I  AN+T  GLA+ +FT ++ R  RV+ +LE G   +N   IS    PFGG K SG GRE  +  ++ + ++K V
Sbjct:  388 ILDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVIRRANNTTFGLASGVFTRDISRAHRVAASLEAGTCFINNYNISPVEVPFGGYKMSGFGRENGQVTIEYYSQLKTV 494          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: XYLG_PSEPU (2-hydroxymuconic semialdehyde dehydrogenase OS=Pseudomonas putida GN=xylG PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338
            ++ + +  +  V T E+FGP   +  F +EEEAI +AN    GLA+ I+T N++R  RV+  +E G+V VN   +      FGG KQSG+GREG  + ++ + E+K +C+
Sbjct:  375 TIWTGLADDSAVVTEEIFGPCCHIRPFDSEEEAIELANSLPYGLASAIWTENVRRAHRVAGQIEAGIVWVNSWFLRDLRTAFGGSKQSGIGREGGVHSLEFYTELKNICV 484          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_SERP5 (Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V ++ + EM +   E+FGPV  +L +++EEE +  ANDT  GLAA + TN+L R  RV   LE G+  +N    S    P GG KQSG+GRE     ++ + +IK V
Sbjct:  372 TVFTDCRDEMEIVREEIFGPVMSILSYQSEEEVVRRANDTTFGLAAGVVTNDLTRAHRVIHQLEAGICWINTWGESAAEMPVGGYKQSGVGRENGLMTLEHYTQIKSV 479          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 332
            +V  +V+  M ++  E+FGPV  +L FKT EE I  AN++  GLAA +FT +L +   +S+AL+ G V VN   +    +PFGG K SG GRE  +YG+  + E+K V
Sbjct:  405 TVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTV 512          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338
            +V  +V+  M ++  E+FGPV  +L FKT EE +  AN++  GLAA +FT +L +   +S+AL+ G V +N   +    +PFGG K SG GRE  +YG+  + E+K V +
Sbjct:  384 TVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGNGRELGEYGLQAYTEVKTVTI 493          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AL1B1_MOUSE (Aldehyde dehydrogenase X, mitochondrial OS=Mus musculus GN=Aldh1b1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338
            +V  +V+  M ++  E+FGPV PL  FK  EE I  AN+T  GLAA +FT +L +    ++AL+ G V VN   I T   PFGG K+SG GRE  + G+  + E+K V +
Sbjct:  403 TVFGDVQDGMRIAKEEIFGPVQPLFKFKKIEEVIQRANNTRYGLAAAVFTRDLDKAIYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLRAYTEVKTVTI 512          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: BETB_AGRRK (Betaine aldehyde dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=betB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.010e-15
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 341
            +V ++V  +M ++  E+FGPV  +L F  E E I  ANDT  GL+  +FT +L R  RV + LE G + +N   ++    PFGG KQSG GRE S   ++ + E+K V +G
Sbjct:  369 TVFADVTDDMTIAREEIFGPVMCVLDFDDEAEVIARANDTEFGLSGGVFTADLTRAHRVVDQLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVG 479          
BLAST of CF832912 vs. ExPASy Swiss-Prot
Match: AMNC_PSESP (2-aminomuconic 6-semialdehyde dehydrogenase OS=Pseudomonas sp. GN=amnC PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.010e-15
Identity = 43/110 (39.09%), Postives = 63/110 (57.27%), Query Frame = 3
Query:    9 SVLSNVKSEMLVST*EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 338
            +V++ +  +  V   E+FGP+  +  F +E E I  ANDT  GLAA I+T NL R  RVSE +  G+  VN   +     PFGG   SG+GREG  + ++ + E+  VC+
Sbjct:  373 TVIAGLSDDARVVREEIFGPICHVTPFDSESEVIRRANDTRYGLAATIWTTNLSRAHRVSELMRVGISWVNTWFLRDLRTPFGGAGLSGIGREGGMHSLNFYSELTNVCV 482          
The following BLAST results are available for this feature:
BLAST of CF832912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
ALDH2_PONAB4.535e-1641.67Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]
ALDH2_HUMAN5.923e-1641.67Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
AL9A1_ORYLA5.923e-1641.12Aldehyde dehydrogenase family 9 member A1 OS=Oryzi... [more]
XYLG_PSEPU7.735e-1638.182-hydroxymuconic semialdehyde dehydrogenase OS=Pse... [more]
BETB_SERP57.735e-1640.74Betaine aldehyde dehydrogenase OS=Serratia proteam... [more]
ALDH2_PIG7.735e-1642.59Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]
ALDH2_HORSE7.735e-1640.00Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
AL1B1_MOUSE7.735e-1642.73Aldehyde dehydrogenase X, mitochondrial OS=Mus mus... [more]
BETB_AGRRK1.010e-1540.54Betaine aldehyde dehydrogenase OS=Agrobacterium ra... [more]
AMNC_PSESP1.010e-1539.092-aminomuconic 6-semialdehyde dehydrogenase OS=Pse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02K13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832912 ID=CF832912; Name=CF832912; organism=Citrus sinensis; type=EST; length=658bp
TTATAGCCTCAGTCCTTAGCAATGTCAAGAGTGAGATGCTTGTTTCGACA
TAGGAAGTATTCGGACCTGTGGCCCCACTTCTATGCTTCAAAACTGAGGA
GGAAGCTATCCATATGGCCAATGATACCAATGCAGGGTTAGCTGCTTATA
TATTTACAAACAATCTTCAACGTACATGGCGTGTCTCTGAAGCTCTAGAA
TATGGACTCGTTGGTGTTAATGAAGGATTAATTTCAACAGAGGTGGCTCC
TTTTGGTGGTGTTAAACAATCTGGTCTTGGACGGGAAGGTTCAAAGTATG
GGATGGATGAATTCCTGGAAATAAAATATGTGTGCTTGGGAGACATGAAC
AGAAAATGATGGGCCAGTTTTGTACCTGTATGTTACCGGGCTTATGGAGA
AGAAGGAAGGAGCCTTTAGTACTGCCTTTGAACTGTATTTTGAAGACGGA
TTGGAATAGTGTGAGCCTCAAGCGTTTGATGTGGAGGTAGTAGTGAGCCA
TAGTTGGTTTGCTATTGATACCCCATGTACATAAATAAGTTTGCAAAATG
GAACTTGAATGTCTAGTAGTGAGCCATAGGTGGTTTGCTATTGATACCCC
ATGTACATAAATAAGTTTGCAAAATGGAACTTGAATGTCTGGTGTCAAAA
AAAAAAAA
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