CF832913
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: SSDH_MOUSE (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.065e-36 Identity = 71/117 (60.68%), Postives = 90/117 (76.92%), Query Frame = -1 Query: 313 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 663 F+EPT+LSNV +ML EE FGP+AP++ F EEEA+ +AN GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G + Sbjct: 407 FFEPTLLSNVTRDMLCITEETFGPLAPVIKFDKEEEAVAIANAAEVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: GABD_RHISN (Probable succinate-semialdehyde dehydrogenase [NADP+] OS=Rhizobium sp. (strain NGR234) GN=gabD PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.917e-36 Identity = 65/117 (55.56%), Postives = 94/117 (80.34%), Query Frame = -1 Query: 313 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 663 F+EPTV+++V M ++ EE FGP+APLL F + + ANDT GLAAY + +NL+R WRV+EALEYG+VG+N G +S+E APFGGVKQSG+GREGS++G++++L++KY+C+G + Sbjct: 375 FFEPTVVTDVSKTMRLAEEETFGPLAPLLRFDDADHVVREANDTIYGLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGVKQSGIGREGSRHGLEDYLDMKYLCVGGL 491
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: SSDH1_SCHPO (Putative succinate-semialdehyde dehydrogenase C1002.12c [NADP+] OS=Schizosaccharomyces pombe GN=SPAC1002.12c PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.064e-31 Identity = 61/117 (52.14%), Postives = 85/117 (72.65%), Query Frame = -1 Query: 313 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 663 ++EPTV+ N K ML+S EE FGPV L F TE+E + AND+ GLA Y+F+ ++ R +RV EAL+ G+VG N GL+S ++PFGGVK+SG GREGSKYG+ E+L+IK + + + Sbjct: 382 YFEPTVIINAKQGMLISEEETFGPVGALFKFDTEDEVVAWANDSPVGLAGYLFSKDISRVFRVGEALQVGMVGCNTGLVSDVLSPFGGVKESGFGREGSKYGISEYLDIKSLTISTL 498
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: UGA2_YEAST (Succinate-semialdehyde dehydrogenase [NADP+] OS=Saccharomyces cerevisiae GN=UGA2 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.072e-28 Identity = 58/117 (49.57%), Postives = 81/117 (69.23%), Query Frame = -1 Query: 313 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 663 FY P +LS+V S +VS+EE FGP+ P+ F T EE + ANDT GLAAY+F+ N+ + VSEALE G+V N G+ S PFGGVK+SG GREGS YG++++ +K + +G++ Sbjct: 377 FYAPVILSHVPSTAIVSKEETFGPLCPIFSFDTMEEVVGYANDTEFGLAAYVFSKNVNTLYTVSEALETGMVSCNTGVFSDCSIPFGGVKESGFGREGSLYGIEDYTVLKTITIGNL 493
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: GABD_BACSU (Succinate-semialdehyde dehydrogenase [NADP+] OS=Bacillus subtilis GN=gabD PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.012e-28 Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = -1 Query: 319 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 663 F PTVL++V + M + EE FGPVAP++ F +EAI +ANDT GLAAY FT N +R +SE LEYG++G N+G S APFGG+K+SG+GREG G++ +LE KY+ +G Sbjct: 347 FVNPTVLTDVDTSMNIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFTENYRRGIYISENLEYGIIGWNDGGPSAVQAPFGGMKESGIGREGGSEGIEPYLETKYLSIG 461
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: SSDH2_SCHPO (Putative succinate-semialdehyde dehydrogenase C139.05 [NADP+] OS=Schizosaccharomyces pombe GN=SPAC139.05 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.082e-25 Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = -1 Query: 322 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 663 F+EPTVLS V +MLV+ EE FGP+A + F EE I AND++ GLA Y+FTNNL V++ LE GLVG N ++ FGG+KQSG G+E + G+ EF+ +K + L Sbjct: 377 FFEPTVLSGVTQDMLVASEETFGPLASVFKFDDTEEVIEWANDSDVGLAGYVFTNNLSTMIHVAKELEVGLVGANIEMVDEPFISFGGIKQSGFGKEAGRLGVQEFMVVKEINL 490
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: BADH_ORYSJ (Betaine aldehyde dehydrogenase OS=Oryza sativa subsp. japonica GN=Os04g0464200 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.929e-22 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = -1 Query: 328 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 663 F EPT+++NV + M + REEVFGPV + F+TE EA+ +ANDT+ GLA + +N+L+R R+S+A++ G+V +N AP+GG K+SG GRE ++G+D +L +K V Sbjct: 376 FIEPTIITNVSTSMQIWREEVFGPVICVKEFRTEREAVELANDTHYGLAGAVISNDLERCERISKAIQSGIVWINCSQPCFVQAPWGGNKRSGFGRELGQWGLDNYLSVKQV 487
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: BADH_ATRHO (Betaine aldehyde dehydrogenase, chloroplastic OS=Atriplex hortensis PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.929e-22 Identity = 55/122 (45.08%), Postives = 83/122 (68.03%), Query Frame = -1 Query: 298 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK*W 663 + EPT+++++ + M + +EEVFGPV + FKTE+EAI +ANDT GLA +F+ +L+R RV++ALE G V VN AP+GGVK+SG GRE ++G++ +L IK V D++ + W Sbjct: 376 YIEPTIITDITTSMQIWKEEVFGPVICVKTFKTEDEAIELANDTEYGLAGAVFSKDLERCERVTKALEVGAVWVNCSQPCFVHAPWGGVKRSGFGRELGEWGIENYLNIKQV-TSDISDEPW 496
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.929e-22 Identity = 53/118 (44.92%), Postives = 79/118 (66.95%), Query Frame = -1 Query: 310 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 663 F EPT++++V + M + REEVFGPV + F +E+EAI +AND++ GL A + +N+ +R R+SEA E G+V +N AP+GGVK+SG GRE ++G+D +L +K V L N Sbjct: 374 FIEPTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSN 491
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: BADH_BETVU (Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.290e-22 Identity = 54/122 (44.26%), Postives = 82/122 (67.21%), Query Frame = -1 Query: 298 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK*W 663 F EPT++S++ + M + REEVFGPV + F +E+EA+ +ANDT GLA+ +F+ +L+R RVS+ LE G V VN AP+GG+K+SG GRE ++G++ +L IK V D++ + W Sbjct: 374 FIEPTIISDISTSMQIWREEVFGPVLCVKTFSSEDEALELANDTEYGLASAVFSKDLERCERVSKLLESGAVWVNCSQPCFVHAPWGGIKRSGFGRELGEWGIENYLNIKQV-TSDISNEPW 494 The following BLAST results are available for this feature:
BLAST of CF832913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832913 ID=CF832913; Name=CF832913; organism=Citrus sinensis; type=EST; length=663bpback to top |