CF832913

Overview
NameCF832913
Unique NameCF832913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: YOSF_SCHPO (Putative aldehyde dehydrogenase-like protein C21C3 OS=Schizosaccharomyces pombe GN=SPBC21C3.15c PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = -1
Query:  355 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGM 663
            ++ PT+L +  +EM +++EE F P+A +   K+ E A+ +AN T  GL A +F  + Q     ++ LE G+V VN+ G       PFGG K+SG GR     G+
Sbjct:  355 YFLPTLLVDATNEMKIAQEECFAPIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGMVAVNDFGAFYLLQMPFGGCKKSGYGRFAGYEGL 458          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: ALDH_MYCTU (Probable aldehyde dehydrogenase OS=Mycobacterium tuberculosis GN=Rv0458 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 37/110 (33.64%), Postives = 61/110 (55.45%), Query Frame = -1
Query:  334 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 663
            + +PT+ +   + M + +EE+FGPV  +  F   ++AI +ANDT  GL A +++ +    +R    ++ G V VN   +    A FGG KQSG+GREG +  +  +   K
Sbjct:  385 YMQPTIFTGTNN-MRIFKEEIFGPVVAVTSFTDYDDAIGIANDTLYGLGAGVWSRDGNTAYRAGRDIQAGRVWVNCYHLYPAHAAFGGYKQSGIGREGHQMMLQHYQHTK 493          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: ALDH_MYCBO (Probable aldehyde dehydrogenase OS=Mycobacterium bovis GN=Mb0467 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 37/110 (33.64%), Postives = 61/110 (55.45%), Query Frame = -1
Query:  334 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 663
            + +PT+ +   + M + +EE+FGPV  +  F   ++AI +ANDT  GL A +++ +    +R    ++ G V VN   +    A FGG KQSG+GREG +  +  +   K
Sbjct:  385 YMQPTIFTGTNN-MRIFKEEIFGPVVAVTSFTDYDDAIGIANDTLYGLGAGVWSRDGNTAYRAGRDIQAGRVWVNCYHLYPAHAAFGGYKQSGIGREGHQMMLQHYQHTK 493          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL3B1_HUMAN (Aldehyde dehydrogenase family 3 member B1 OS=Homo sapiens GN=ALDH3B1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = -1
Query:  346 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMDEF 663
            +  PTVL +V+    V +EE+FGP+ P++  ++ +EAI   N     LA Y F+N+ Q   RV      G    N+G +   +A  PFGGV  SG+GR   K+  D F
Sbjct:  315 YIAPTVLVDVQEMEPVMQEEIFGPILPIVNVQSLDEAIEFINRREKPLALYAFSNSSQVVKRVLTQTSSGGFCGNDGFMHMTLASLPFGGVGASGMGRYHGKFSFDTF 422          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL3A2_PONAB (Fatty aldehyde dehydrogenase OS=Pongo abelii GN=ALDH3A2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11
Identity = 39/122 (31.97%), Postives = 65/122 (53.28%), Query Frame = -1
Query:  304 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK 663
            +  PTVL++V  +  V +EE+FGP+ P++  K  +EAI+  N+    LA Y+F++N +   R+ +    G V  N+ ++       PFGGV  SG+G    K+  D F   +   L  + R+
Sbjct:  312 YIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINEREKPLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFMLNSFPFGGVGSSGMGAYHGKHSFDTFSHQRPCLLKSLKRE 433          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL3A1_MOUSE (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus GN=Aldh3a1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11
Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = -1
Query:  346 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGSKYGMDEF 663
            +  PT+L +V  +  V +EE+FGPV P++C ++ +EAI   N     LA Y+F+NN +   ++      G V  N+ +  I+    PFGGV  SG+G    K   + F
Sbjct:  315 YIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLDEAIKFINQREKPLALYVFSNNDKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 422          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL3A1_HUMAN (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Homo sapiens GN=ALDH3A1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11
Identity = 37/108 (34.26%), Postives = 59/108 (54.63%), Query Frame = -1
Query:  346 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGSKYGMDEF 663
            +  PT+L++V  +  V +EE+FGPV P++C ++ EEAI   N     LA Y+F++N +   ++      G V  N+ +  I+    PFGGV  SG+G    K   + F
Sbjct:  315 YIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETF 422          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: ALDH3_BACSU (Probable aldehyde dehydrogenase aldX OS=Bacillus subtilis GN=aldX PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11
Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = -1
Query:  328 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 654
            PTVL NV  +M + +EE+F  + P++ ++  +E I   ND +  LA Y+F+ N      V +    G   +N+ ++  S    PFGGV  SG+G     YG  EF   K V
Sbjct:  329 PTVLKNVTPDMKIMQEEIFASILPMMNYEDIDEVIDYVNDRDKPLALYVFSKNQDLIDNVLQHTTSGNAAINDVVVHFSDVNLPFGGVNTSGIGSYHGVYGFKEFSHEKGV 439          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL3A1_CANFA (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Canis familiaris GN=ALDH3A1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11
Identity = 36/108 (33.33%), Postives = 58/108 (53.70%), Query Frame = -1
Query:  346 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--APFGGVKQSGLGREGSKYGMDEF 663
            +  PT+L +V ++  V +EE+FGPV P++C ++ EEAI   N     LA Y+F+ N +   ++      G V  N+ ++   V   P+GGV  SG+G    K   + F
Sbjct:  315 YIAPTILIDVDTQSQVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSLNDKMIKKMIAETSSGGVTANDVIVHVSVHSLPYGGVGNSGMGSYHGKKSFETF 422          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: CALB_PSEUH (Coniferyl aldehyde dehydrogenase OS=Pseudomonas sp. (strain HR199 / DSM 7063) GN=calB PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 9.928e-11
Identity = 39/111 (35.14%), Postives = 56/111 (50.45%), Query Frame = -1
Query:  328 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 654
            PT++ NV  EMLV  EE+FGP+ P+  ++  + AI   N     LA+Y F  +     +V +    G V VN+ +  +  +  PFGGV  SG+G     YG   F   K V
Sbjct:  338 PTLIVNVSDEMLVLNEEIFGPLLPIKTYRDFDSAIDYVNSKQRPLASYFFGEDAVEREQVLKRTVSGAVVVNDVMSHVMMDTLPFGGVGHSGMGAYHGIYGFRTFSHAKPV 448          
The following BLAST results are available for this feature:
BLAST of CF832913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
YOSF_SCHPO4.457e-1136.54Putative aldehyde dehydrogenase-like protein C21C3... [more]
ALDH_MYCTU4.457e-1133.64Probable aldehyde dehydrogenase OS=Mycobacterium t... [more]
ALDH_MYCBO4.457e-1133.64Probable aldehyde dehydrogenase OS=Mycobacterium b... [more]
AL3B1_HUMAN5.820e-1137.04Aldehyde dehydrogenase family 3 member B1 OS=Homo ... [more]
AL3A2_PONAB5.820e-1131.97Fatty aldehyde dehydrogenase OS=Pongo abelii GN=AL... [more]
AL3A1_MOUSE5.820e-1134.26Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
AL3A1_HUMAN5.820e-1134.26Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
ALDH3_BACSU7.602e-1134.23Probable aldehyde dehydrogenase aldX OS=Bacillus s... [more]
AL3A1_CANFA7.602e-1133.33Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
CALB_PSEUH9.928e-1135.14Coniferyl aldehyde dehydrogenase OS=Pseudomonas sp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02K13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832913 ID=CF832913; Name=CF832913; organism=Citrus sinensis; type=EST; length=663bp
TTTTTTTTTTTCTGACACCAGACATTCAAGTTCCATTTTGCAAACTTATT
TATGTACATGGGGTATCAATAGCAAACCACCTATGGCTCACTACTAGACA
TTCAAGTTCCATTTTGCAAACTTATTTATGTACATGGGGTATCAATAGCA
AACCAACTATGGCTCACTACTACCTCCACATCAAACGCTTGAGGCTCACA
CTATTCCAATCCGTCTTCAAAATACAGTTCAAAGGCAGTACTAAAGGCTC
CTTCCTTCTTCTCCATAAGCCCGGTAACATACAGGTACAAAACTGGCCCA
TCATTTTCTGTTCATGTCTCCCAAGCACACATATTTTATTTCCAGGAATT
CATCCATCCCATACTTTGAACCTTCCCGTCCAAGACCAGATTGTTTAACA
CCACCAAAAGGAGCCACCTCTGTTGAAATTAATCCTTCATTAACACCAAC
GAGTCCATATTCTAGAGCTTCAGAGACACGCCATGTACGTTGAAGATTGT
TTGTAAATATATAAGCAGCTAACCCTGCATTGGTATCATTGGCCATATGG
ATAGCTTCCTCCTCAGTTTTGAAGCATAGAAGTGGGGCCACAGGTCCGAA
TACTTCCTCTCTCGAAACAAGCATCTCACTCTTGACATTGCTAAGGACTG
TAGGCTCATAAAA
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