CF832913

Overview
NameCF832913
Unique NameCF832913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: ALD1_STAES (Putative aldehyde dehydrogenase SE_1720 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1720 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20
Identity = 46/112 (41.07%), Postives = 71/112 (63.39%), Query Frame = -1
Query:  328 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 663
            F  PT+  NV + M +++EE+FGPV  ++ +   +EAI +ANDT  GLA Y+   +      V+ ++E G + +NE     ++ PFGG K+SGLGRE   YG++EFLE+K +
Sbjct:  360 FARPTIFINVDNHMTIAQEEIFGPVMSVITYNNLDEAIEIANDTKYGLAGYVIGKDKDTLRHVARSIEAGTIEINEAGRKPDL-PFGGYKESGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: ALD1_STAEQ (Putative aldehyde dehydrogenase SERP1729 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1729 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20
Identity = 46/112 (41.07%), Postives = 71/112 (63.39%), Query Frame = -1
Query:  328 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 663
            F  PT+  NV + M +++EE+FGPV  ++ +   +EAI +ANDT  GLA Y+   +      V+ ++E G + +NE     ++ PFGG K+SGLGRE   YG++EFLE+K +
Sbjct:  360 FARPTIFINVDNHMTIAQEEIFGPVMSVITYNNLDEAIEIANDTKYGLAGYVIGKDKDTLRHVARSIEAGTIEINEAGRKPDL-PFGGYKESGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL9A1_RAT (4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20
Identity = 48/119 (40.34%), Postives = 73/119 (61.34%), Query Frame = -1
Query:  313 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDM 663
            +  P +L+N   +M   +EE+FGPV  +L F+TE E +  ANDT  GLAA +FT ++QR  RV+  L+ G   +N   +S    PFGG K+SG GRE  +  ++ + ++K VC  +GD+
Sbjct:  372 YMTPCILTNCTDDMTCVKEEIFGPVMSILTFETEAEVLERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEMGDV 490          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL9A1_PONAB (4-trimethylaminobutyraldehyde dehydrogenase OS=Pongo abelii GN=ALDH9A1 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20
Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = -1
Query:  313 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDM 663
            +  P VL+N + +M   +EE+FGPV  +L F TE E +  ANDT  GLAA +FT ++QR  RV   L+ G   +N   +S    PFGG K+SG GRE  +  ++ + ++K VC  +GD+
Sbjct:  372 YMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGTCFINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEMGDV 490          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL9A1_MOUSE (4-trimethylaminobutyraldehyde dehydrogenase OS=Mus musculus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20
Identity = 48/119 (40.34%), Postives = 73/119 (61.34%), Query Frame = -1
Query:  313 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDM 663
            +  P +L+N + +M   +EE+FGPV  +L F TE E +  ANDT  GLAA +FT ++QR  RV+  L+ G   +N   +S    PFGG K+SG GRE  +  ++ + ++K VC  +GD+
Sbjct:  372 YMTPCILTNCRDDMTCVKEEIFGPVMSILTFGTEAEVLERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEMGDV 490          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL9A1_HUMAN (4-trimethylaminobutyraldehyde dehydrogenase OS=Homo sapiens GN=ALDH9A1 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20
Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = -1
Query:  313 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDM 663
            +  P VL+N + +M   +EE+FGPV  +L F TE E +  ANDT  GLAA +FT ++QR  RV   L+ G   +N   +S    PFGG K+SG GRE  +  ++ + ++K VC  +GD+
Sbjct:  372 YMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGTCFINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEMGDV 490          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL8A1_HUMAN (Aldehyde dehydrogenase family 8 member A1 OS=Homo sapiens GN=ALDH8A1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20
Identity = 51/112 (45.54%), Postives = 72/112 (64.29%), Query Frame = -1
Query:  328 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 663
            F  PTV++++K E     EE+FGPV  ++ F +EEE I  AN+   GLAA ++++N+ R  RV++ L+ GLV  N  LI     PFGG+K SG+GREG+K   D F EIK +
Sbjct:  372 FMLPTVITDIKDESCCMTEEIFGPVTCVVPFDSEEEVIERANNVKYGLAATVWSSNVGRVHRVAKKLQSGLVWTNCWLIRELNLPFGGMKSSGIGREGAKDSYDFFTEIKTI 483          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL1B1_PONAB (Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = -1
Query:  322 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 663
            F +PTV   V+ +M +++EE+FGPV PL  FK  EE I  AN T  GLAA +FT +L +    ++AL+ G V VN   I T   PFGG K+SG GRE  + G+  + E+K V +
Sbjct:  397 FIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKMEEVIERANTTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTI 510          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: AL1B1_HUMAN (Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20
Identity = 50/114 (43.86%), Postives = 71/114 (62.28%), Query Frame = -1
Query:  322 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 663
            F +PTV   V+ +M +++EE+FGPV PL  FK  EE +  AN+T  GLAA +FT +L +    ++AL+ G V VN   I T   PFGG K+SG GRE  + G+  + E+K V +
Sbjct:  397 FIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKIEEVVERANNTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTI 510          
BLAST of CF832913 vs. ExPASy Swiss-Prot
Match: LADH_METMP (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis GN=MMP1487 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.528e-19
Identity = 48/112 (42.86%), Postives = 73/112 (65.18%), Query Frame = -1
Query:  322 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 654
            P V+ N+  E ++S+ E FGP+ P+L  K  EEA+++AN++  GL A +FTNN+    ++++ LEYG + +N       +  PFGGVK+SGLGREG KY ++E  E K V +
Sbjct:  352 PAVI-NIDEENILSKIETFGPILPILTVKDSEEAVNIANNSKYGLQAGLFTNNINNAMKIADELEYGGIMINSSPTFRKDNMPFGGVKKSGLGREGIKYTVEEMSETKTVVI 462          
The following BLAST results are available for this feature:
BLAST of CF832913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
ALD1_STAES8.959e-2041.07Putative aldehyde dehydrogenase SE_1720 OS=Staphyl... [more]
ALD1_STAEQ8.959e-2041.07Putative aldehyde dehydrogenase SERP1729 OS=Staphy... [more]
AL9A1_RAT8.959e-2040.344-trimethylaminobutyraldehyde dehydrogenase OS=Rat... [more]
AL9A1_PONAB8.959e-2041.184-trimethylaminobutyraldehyde dehydrogenase OS=Pon... [more]
AL9A1_MOUSE8.959e-2040.344-trimethylaminobutyraldehyde dehydrogenase OS=Mus... [more]
AL9A1_HUMAN8.959e-2041.184-trimethylaminobutyraldehyde dehydrogenase OS=Hom... [more]
AL8A1_HUMAN8.959e-2045.54Aldehyde dehydrogenase family 8 member A1 OS=Homo ... [more]
AL1B1_PONAB8.959e-2044.74Aldehyde dehydrogenase X, mitochondrial OS=Pongo a... [more]
AL1B1_HUMAN8.959e-2043.86Aldehyde dehydrogenase X, mitochondrial OS=Homo sa... [more]
LADH_METMP1.528e-1942.86Lactaldehyde dehydrogenase OS=Methanococcus maripa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02K13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832913 ID=CF832913; Name=CF832913; organism=Citrus sinensis; type=EST; length=663bp
TTTTTTTTTTTCTGACACCAGACATTCAAGTTCCATTTTGCAAACTTATT
TATGTACATGGGGTATCAATAGCAAACCACCTATGGCTCACTACTAGACA
TTCAAGTTCCATTTTGCAAACTTATTTATGTACATGGGGTATCAATAGCA
AACCAACTATGGCTCACTACTACCTCCACATCAAACGCTTGAGGCTCACA
CTATTCCAATCCGTCTTCAAAATACAGTTCAAAGGCAGTACTAAAGGCTC
CTTCCTTCTTCTCCATAAGCCCGGTAACATACAGGTACAAAACTGGCCCA
TCATTTTCTGTTCATGTCTCCCAAGCACACATATTTTATTTCCAGGAATT
CATCCATCCCATACTTTGAACCTTCCCGTCCAAGACCAGATTGTTTAACA
CCACCAAAAGGAGCCACCTCTGTTGAAATTAATCCTTCATTAACACCAAC
GAGTCCATATTCTAGAGCTTCAGAGACACGCCATGTACGTTGAAGATTGT
TTGTAAATATATAAGCAGCTAACCCTGCATTGGTATCATTGGCCATATGG
ATAGCTTCCTCCTCAGTTTTGAAGCATAGAAGTGGGGCCACAGGTCCGAA
TACTTCCTCTCTCGAAACAAGCATCTCACTCTTGACATTGCTAAGGACTG
TAGGCTCATAAAA
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