CF832937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 1.867e-19 Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 +FV A ISGGH+NPAVT GL + ++++ Y +AQ LG+ L+K G +A G + G+ EII TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARS AV+ + W++W GP Sbjct: 67 LFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHG----VAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGP 221
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.867e-19 Identity = 56/155 (36.13%), Postives = 82/155 (52.90%), Query Frame = 3 Query: 33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 +SG HINPAVTF + ++SL RA+ Y+ AQ LGA++G ++ + R N L G S G EI T V +F+ D +R+ R V L IGF++ + HL + TG +NPARS AV+ + + + W++WVGP Sbjct: 62 VSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPA-AIRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVL---TRNFTNHWVYWVGP 208
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.438e-19 Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 +FV A ISGGH+NPAVT GL + ++++ Y +AQ LG+ L+K G +A G + G+ EII TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARS AV+ + W++W GP Sbjct: 67 LFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHG----VAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGP 221
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.431e-19 Identity = 57/166 (34.34%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 +F + +SGGH+NPAV+FG + ++S++RAV Y +AQ LG+I +++ + ++ G G E++ TF L+YTV+ +A DPKR A V +APL IG V L P G +NPA + +++ Q W W+FWVGP Sbjct: 69 LFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRP----SGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQ---WHQHWIFWVGP 223
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.431e-19 Identity = 56/172 (32.56%), Postives = 94/172 (54.65%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVK--AFQKSYYTRYGGGAN-----ELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 + + + ISG HINPAV+ GL+ A++ + Y+ AQ LG I+G G++ A K+ ++ GG A+ GY+ L E++ TF+ + + +TD +R+ + AP+ IG ++ ++HL +IP+T T +NPARS ++ D A + WLFW+ P Sbjct: 49 LLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGAGVLYLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTD-RRAPKG-----FAPIAIGLSLTLIHLISIPVTNTSVNPARS-TGPALFVGDWAIAELWLFWLAP 213
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.093e-19 Identity = 55/155 (35.48%), Postives = 82/155 (52.90%), Query Frame = 3 Query: 33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 ISG H+NPAVTF + ++SL+RA YM AQ LGA++G ++ + R N L G S EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARS A++ + + + W++WVGP Sbjct: 62 ISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGP 208
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.210e-18 Identity = 65/169 (38.46%), Postives = 90/169 (53.25%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVK--AFQKSYYTR-YGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 +FV A SGGH+NPAVTFGL + ++++ + Y VAQ LGA L++ K+ T GG EL G+ EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARS AV + W++WVGP Sbjct: 67 LFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTELE-------GVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAAD---FAGNWVYWVGP 221
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.210e-18 Identity = 54/155 (34.84%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 ISG H+NPAVTF + ++SL+RA YM AQ LGA++G ++ + R N L S G EI T V +F+ D +R+ + V L +GF++ + HL + TG G+NPARS A++ + + W++WVGP Sbjct: 62 ISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGP 208
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEAE (Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.210e-18 Identity = 56/172 (32.56%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVG---LVKAFQKSYYTRYGGGANELAD----GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 + + Y ISG H+NPAV+ GL++ + + + Y+VAQ LG ++ G L+ + + + G +N + GYS L +E++ T + + + AT KR+ + AP+ IG + ++HL +IP+T T +NPARS A +Y D A WLFWV P Sbjct: 46 VLTMAYAIGPISGAHLNPAVSVGLWVGGRFPASQLLPYVVAQVLGGLAAGGVLYLIASGKAGFDLAAGFASNGYGEHSPGGYSLQAALVSEVVLTGMFLLIILGATS-KRAPQG-----FAPIAIGLTLTLIHLISIPVTNTSVNPARS-TAVALYVGDWAVSQLWLFWVAP 210
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.064e-18 Identity = 59/180 (32.78%), Postives = 84/180 (46.67%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAIS-------------GVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQ--WLFWVGP 497 + + Y ISG H+NPAV+ GL+ + + Y+VAQ LGAI+ G + K F + Y + G GYS L E++ T + + ATD + A APL IG A+ ++HL +IP+T T +NPARS A+ W Q WLFW+ P Sbjct: 46 VVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPG------GYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG---GWAVQQLWLFWLAP 210 The following BLAST results are available for this feature:
BLAST of CF832937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832937 ID=CF832937; Name=CF832937; organism=Citrus sinensis; type=EST; length=501bpback to top |