CF832937

Overview
NameCF832937
Unique NameCF832937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length501
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.597e-18
Identity = 62/172 (36.05%), Postives = 83/172 (48.26%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGA-ISGVGLVKAFQKSYYTRYGG-GANELAD----GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            +  + Y   GISGGH NPAV+ GL +A K      V Y+VAQ LGA ++   L            GG  AN   +    GYS    L  EII T   +  +  +T          VPV  AP+ IG A+ ++HL +IP+T T +NPARS     ++    A    WLFW+ P
Sbjct:   47 VLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGST-------HGRVPVGFAPVAIGLALTLIHLISIPVTNTSVNPARS-TGQALFVGGWALQQLWLFWLAP 210          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 6.004e-18
Identity = 58/161 (36.02%), Postives = 84/161 (52.17%), Query Frame = 3
Query:   36 SGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTG------VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVI-YNQDKAWDDQWLFWVGP 497
            SGGH+NPAVTFG+ + R++S  RA +Y  AQ LGA+  V L++           GG   +  G++ G        L  E++ TF LVYTV++    +RS        +APL IG       LA  P  G  +NPAR+   A++ +N    W   W++W+GP
Sbjct:   87 SGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPM--GFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWN----WRHHWVYWLGP 229          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.842e-18
Identity = 58/178 (32.58%), Postives = 84/178 (47.19%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGY-STGVG------------LAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            +  + Y    ISG H+NPAVT GL    +  + +   Y++AQ LGAI+   L+      Y    G    +LA G+ S G G               E++ T + ++ +  +T  K  A        APL IG A+ M+HL +IP+T T +NPARS     ++    A    WLFWV P
Sbjct:   48 VVTMAYAIGHISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALL------YLIASGAAGFDLAKGFASNGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMGSTHGKAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARS-TGPALFVGGWAIGQLWLFWVAP 212          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.024e-17
Identity = 57/174 (32.76%), Postives = 79/174 (45.40%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELA---------DGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            +F   Y    ISGGH NPAV+FGL++ ++    +   Y+ AQ LGAI     +    +        G+N LA          GY     L  E + TF+ +  +   TD    A        AP  IG A+ ++HL +IPIT T +NPARS   A+           WLFW+ P
Sbjct:   54 VFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGVTDKTAPAG------FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAP 221          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.747e-17
Identity = 53/173 (30.64%), Postives = 81/173 (46.82%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYY----TRYGGGANELAD----GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            +  + +    ISG H+NPAVT GL+   +      V Y++AQ +G +   G++            T  G  +N   +    GYS    L  E++ T + +  +  ATD +           AP+ IG  + ++HL +IP+T T +NPARS     +Y  D A    WLFWV P
Sbjct:   46 VLTMAFAIGHISGCHLNPAVTIGLWAGGRFEAKEIVPYILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEVVMTMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARS-TGVALYVGDWATAQLWLFWVAP 211          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBPA (Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.282e-17
Identity = 58/173 (33.53%), Postives = 88/173 (50.87%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAI--SGVGLVKAFQKSYYTRYGGG--ANELADG----YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            +  + +    ISG H+NPAVT GL+   +        Y++AQ +G +   G+  V A  ++ +   G G  AN   +     YS    L +EI+ T + +  +  ATD KR+ +       AP+ IG  + ++HL +IP+T T +NPARS  A  +Y  D A    WLFWV P
Sbjct:   46 VLTMAFAIGHISGCHLNPAVTVGLWAGGRFDTKDVAPYIIAQVIGGLIAGGILYVIATGQAGFDVVGSGFAANGYGEHSPGQYSMLAALVSEIVMTMMFLIVIMGATD-KRAPQG-----FAPIAIGLCLTLIHLISIPVTNTSVNPARS-TAVAMYVGDWAVSQLWLFWVAP 211          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.980e-17
Identity = 56/174 (32.18%), Postives = 83/174 (47.70%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQK---------SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            +  + Y    ISGGH NPAVT GL  + +        Y+VAQ +GAI     + +  +         S +   G G +     YS    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ ++HL +IP+T T +NPARS     ++    A +  WLFW+ P
Sbjct:   50 VLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGK-YSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARS-TGPALFVGGWALEQLWLFWLAP 215          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.980e-17
Identity = 56/174 (32.18%), Postives = 83/174 (47.70%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQK---------SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            +  + Y    ISGGH NPAVT GL  + +        Y+VAQ +GAI     + +  +         S +   G G +     YS    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ ++HL +IP+T T +NPARS     ++    A +  WLFW+ P
Sbjct:   50 VLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGK-YSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARS-TGPALFVGGWALEQLWLFWLAP 215          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_SHEON (Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.892e-17
Identity = 52/172 (30.23%), Postives = 84/172 (48.84%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVG---LVKAFQKSYYTRYGGGANELAD----GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            +  + +    ISG H+NPAV+FGL+   +      + Y++AQ  G I+G G   L+ + Q+ +    G  +N   +    GYS    +  EI+ T   +  +  +TD +           AP+ IG  + ++HL +IPI+ T +NPARS     ++  D A    WLFW  P
Sbjct:   47 VLTMAFAIGHISGCHLNPAVSFGLWAGGRFPTSELLPYIIAQVAGGIAGAGVLYLIASGQEGFSLAAGFASNGFGEHSPGGYSMISVMICEIVMTLFFLLVILGSTDERAPKG------FAPIAIGLCLTLIHLISIPISNTSVNPARS-TGPALFVGDWAVSQLWLFWAAP 211          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 3.892e-17
Identity = 56/154 (36.36%), Postives = 79/154 (51.30%), Query Frame = 3
Query:   36 SGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            SG H NPAVT    +   +SL RAV Y+ AQ +GA  G  L+         R   G N + +  STG  +A E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NPARS   A+I  +   +   W+FWVGP
Sbjct:   77 SGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPG-DIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGS------PATMIGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGP 220          
The following BLAST results are available for this feature:
BLAST of CF832937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
AQPZ1_AGRT54.597e-1836.05Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
TIP32_ORYSJ6.004e-1836.02Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
AQPZ_RHOPA7.842e-1832.58Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]
AQPZ_SYNY31.024e-1732.76Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
AQPZ_VIBVU1.747e-1730.64Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]
AQPZ_VIBPA2.282e-1733.53Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=... [more]
AQPZ_BORPA2.980e-1732.18Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR2.980e-1732.18Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
AQPZ_SHEON3.892e-1730.23Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 ... [more]
AQP6_HUMAN3.892e-1736.36Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832937 ID=CF832937; Name=CF832937; organism=Citrus sinensis; type=EST; length=501bp
TGATCTTTGTCCTCTTTTACTGCACCGCCGGTATCTCAGGTGGTCACATT
AACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGT
CCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCAATCTCCGGTG
TTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGT
GGGGCCAACGAGCTGGCCGATGGGTACAGCACAGGCGTTGGATTGGCCGC
CGAGATCATCGGCACCTTTGTGTTGGTTTACACTGTCTTCTCGGCCACTG
ATCCCAAAAGAAGCGCCAGAGACTCCCATGTCCCCGTTTTGGCACCGCTC
CCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCTATCAC
TGGCACTGGCATTAACCCAGCAAGGAGTCTCGTGGCCGCTGTTATTTACA
ACCAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCTTC
A
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