CF832937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 4.303e-16 Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = 3 Query: 3 IFVLFYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGA---NELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 + V TAG +SGGH+NPAVT L + ++L R+ +Y+ AQ G+ L++ GG A + LADG G+AAE + TF L+ + + DP+R+A P PL G V +A +TG +NPARS A+ + W W++WVGP Sbjct: 69 LVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLT-------GGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAA----PPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGE---WAHHWVYWVGP 225
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.303e-16 Identity = 55/178 (30.90%), Postives = 80/178 (44.94%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAI-------------SGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 + + Y ISG H+NPAVT GL + + + Y++AQ GAI G + K F + Y + G YS E++ T + ++ + AT + A APL IG A+ M+HL +IP+T T +NPARS ++ A WLFWV P Sbjct: 48 VVTMAYAIGHISGCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFASNGYDAHSPGQ------YSMMACFLTEVVMTMMFLFIIMGATHGRAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARS-TGPALFVGGWAMAQLWLFWVAP 212
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.620e-16 Identity = 56/161 (34.78%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 24 TAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 TAG +SGGH+NPAVT GL + ++ +RAV+Y+ AQ L + + L++ T + L G S GL E+I TF L++ ++ DP+ S V + PL G V LA TG +NPARS A+ W + W++W+GP Sbjct: 78 TAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVT----PVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGD---WTNHWVYWIGP 226
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.340e-16 Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 3 Query: 12 LFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 L + +G+SG ++NPAVT L+ +V L+ ++ Y+ AQ LG I+G G++ + Y R G LA G +TG E++ T +L V + + D + +AP IG A+F+ +G +NP R L ++I W W++W+GP Sbjct: 83 LIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCLPNMY-RIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTS--VFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLGPSII---SGVWSHHWVYWLGP 238
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.340e-16 Identity = 58/159 (36.48%), Postives = 78/159 (49.06%), Query Frame = 3 Query: 36 SGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-----GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 SG H NPAVT + +SL RAV Y+ AQ GA G L+ Y GG G N + + STG +A E++ T LV VF++ D +++ IG +V + HL I TG +NPARS AVI + + W+FWVGP Sbjct: 74 SGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALL------YGVTPGGVRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGS------PAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK---FAVHWIFWVGP 217
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.340e-16 Identity = 57/159 (35.85%), Postives = 79/159 (49.69%), Query Frame = 3 Query: 36 SGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-----GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 SG H NPAVT + +SL RA+ Y+ AQ GA +G L+ Y GG G N + + STG +A E++ T LV VF++ D +++ IG +V + HL I TG +NPARS AVI + + W+FWVGP Sbjct: 74 SGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALL------YGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLAS------PAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK---FAVHWIFWVGP 217
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.586e-16 Identity = 54/167 (32.34%), Postives = 83/167 (49.70%), Query Frame = 3 Query: 12 LFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-----TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 + + +GISG +NPAVT G ++ ++ + +++ QC+GA+ G G++KA ++Y R A LA G + G E++ T LV+ V++ DPK S +APL IG AV TG +NPARS AV W +++W GP Sbjct: 80 IIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYER-DLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPKISR-------VAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPAVF---SDTWHRHYIYWFGP 235
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.252e-15 Identity = 56/158 (35.44%), Postives = 80/158 (50.63%), Query Frame = 3 Query: 33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAF--QKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV-FSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 ISGGH NPAV+ L ++LV + Y V+Q LG + G L KA ++ ++ G + + L AEII T +L V A + K LAP IGFAV + LA P++G +NPAR+ AV+ N W+ W++W+GP Sbjct: 86 ISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTKG------PLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANH---WNFHWIYWLGP 234
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.643e-15 Identity = 55/168 (32.74%), Postives = 84/168 (50.00%), Query Frame = 3 Query: 3 IFVLFYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 + V TAG ISGGH+NPAVT L + V+L R+ +Y+ AQ L + + L++ T + LA+G G+ AE + TF L++ +++ DP++ +P PL G V +A ++G +NPARS AV W W++WVGP Sbjct: 64 LVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLAT----PVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL-----LPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAV---ASGVWTHHWVYWVGP 219
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.361e-14 Identity = 53/161 (32.92%), Postives = 80/161 (49.69%), Query Frame = 3 Query: 24 TAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 TAG +SGGH+NPAVT G+ + ++ +RA++Y+ AQ L + L++ T + L G GL E+I TF L++ ++ DP+ S V + PL G V LA TG +NPARS A+ W + W++W+GP Sbjct: 80 TAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVT----PVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATG---VWTNHWVYWIGP 228 The following BLAST results are available for this feature:
BLAST of CF832937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832937 ID=CF832937; Name=CF832937; organism=Citrus sinensis; type=EST; length=501bpback to top |