CF832937

Overview
NameCF832937
Unique NameCF832937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length501
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.999e-13
Identity = 51/165 (30.91%), Postives = 78/165 (47.27%), Query Frame = 3
Query:   12 LFYCTAG-ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAF--QKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            L   T G ISGGH NPAV+  + L   +  +  + Y V+Q  G + G  L K    ++ ++   G     + +       L  EI+ T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+   AV+      WD  W++W+GP
Sbjct:   80 LIIATLGNISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVMAGY---WDFHWIYWLGP 236          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 57/164 (34.76%), Postives = 80/164 (48.78%), Query Frame = 3
Query:   24 TAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGA---NELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            TAG  +SGGH+NPAVT  L     ++  R+ +Y+ AQ L +     L++     Y T  GG A   + L  G     GL  EII TF L++ V++   DP+     S VP   PL  G  V    +A    +G  +NPARS   A+       W   W++W+GP
Sbjct:   74 TAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLR-----YLT--GGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPR-----SSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATG---VWTHHWIYWLGP 222          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.816e-13
Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = 3
Query:   12 LFYCTAG-ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAF--QKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            L   T G ISGGH NPAV+  + +   +  +  + Y ++Q  G + G  L K    ++ ++   G     + +       L  EII T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+   AV+      WD  W++W+GP
Sbjct:   78 LIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQIFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVTEALGVEIILTILLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVVAGY---WDFHWIYWLGP 234          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.816e-13
Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = 3
Query:   12 LFYCTAG-ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAF--QKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            L   T G ISGGH NPAV+  + +   +  +  + Y ++Q  G + G  L K    ++ ++   G     + +       L  EII T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+   AV+      WD  W++W+GP
Sbjct:   78 LIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAGY---WDFHWIYWLGP 234          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: NO26_SOYBN (Nodulin-26 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 3
Query:    9 VLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA---EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            VL Y    ISGGH NPAVT      R+  L++   Y+VAQ LG+I   G ++         + G  ++ +     G  L A   E I TF L++ +       R+     V   A + IG  + +  +   P+TG  +NPARSL  A ++ +   ++  W++ + P
Sbjct:   83 VLVYTVGHISGGHFNPAVTIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLL-------FMGNHDQFSGTVPNGTNLQAFVFEFIMTFFLMFVICGVATDNRA-----VGEFAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGE---YEGIWIYLLAP 233          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 2.210e-12
Identity = 54/172 (31.40%), Postives = 82/172 (47.67%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLG---AISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSA----RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            +F   +  A +SGGH+NPAVTF   +   +++  A+ Y  +Q LG   A   +  + A Q    TR    A E+  G+  G+    E + TF++VYTV  A DP+       +      L  L +G       LA   +TG  +NPARS   AV+      + +Q ++W GP
Sbjct:   66 LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRI---AVEMT-GFGAGI---LEGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGH---YSNQAVYWAGP 227          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.210e-12
Identity = 49/167 (29.34%), Postives = 82/167 (49.10%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGA-ISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGPF 500
            + V+ Y T  ISG H NPAVT    + R+    +  +Y+ AQ  G+ ++ + L   F  +    +G    +     S+G  L AEII +F+L++ +       R+  +     LA + +G  + +      PI+G  +NPARSL  A++  + K     W++ VGPF
Sbjct:   86 VMVMIYSTGHISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTTPTD-----SSGQALVAEIIISFLLMFVISGVATDSRATGE-----LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKG---IWVYIVGPF 239          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: PDUF_SALTY (Propanediol diffusion facilitator OS=Salmonella typhimurium GN=pduF PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.097e-11
Identity = 51/158 (32.28%), Postives = 74/158 (46.84%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGAN---------ELADGYSTGVGLA--------AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPAR 425
            I +  Y TAGISGGH+NPAVT  L+L       + + Y++AQ  GA  G  L      S +T +    +         +LA  +ST    A         E++ T +L+  + + TD            LAPL IG  V ++  +T P+TG  +NPAR
Sbjct:   50 ISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKG---PLAPLLIGILVAVIGASTGPLTGFAMNPAR 204          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.191e-11
Identity = 49/165 (29.70%), Postives = 73/165 (44.24%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497
            + V+ Y    ISG H NPAVT      R+    +   Y  AQ LGA    G ++      +  + G     +D  S    L  E I TF L++ +       R+     +  LA L +G  + +  L   PI+G  +NPARSL  A+I  +   +   W++ VGP
Sbjct:   91 VMVMVYAVGHISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPGTLPAGSDVQS----LVLEFIITFYLMFVISGVATDNRA-----IGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGE---YRSIWVYIVGP 243          
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 4.168e-11
Identity = 50/164 (30.49%), Postives = 77/164 (46.95%), Query Frame = 3
Query:   18 YCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSL---VAAVIYNQDKAWDDQWLFWVGP 497
            Y    ISG HINPAVT GL+  +K      V Y++AQ LGA  G  +            GG GA     G S    + AE++GTF+L+ T+      +R+ +       A + IG  V  +      I+G+ +NPAR+    +  +I+     W+   ++ +GP
Sbjct:   71 YALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGP 229          
The following BLAST results are available for this feature:
BLAST of CF832937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
AQP8_RAT1.999e-1330.91Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]
TIP41_ORYSJ3.410e-1334.76Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
AQP8_NOTAL5.816e-1330.30Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
AQP8_MOUSE5.816e-1330.30Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
NO26_SOYBN1.692e-1229.52Nodulin-26 OS=Glycine max PE=1 SV=2[more]
TIP51_ORYSJ2.210e-1231.40Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
NIP42_ARATH2.210e-1229.34Probable aquaporin NIP4-2 OS=Arabidopsis thaliana ... [more]
PDUF_SALTY1.097e-1132.28Propanediol diffusion facilitator OS=Salmonella ty... [more]
NIP11_ORYSJ3.191e-1129.70Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica G... [more]
AQPM_METTM4.168e-1130.49Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832937 ID=CF832937; Name=CF832937; organism=Citrus sinensis; type=EST; length=501bp
TGATCTTTGTCCTCTTTTACTGCACCGCCGGTATCTCAGGTGGTCACATT
AACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGT
CCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCAATCTCCGGTG
TTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGT
GGGGCCAACGAGCTGGCCGATGGGTACAGCACAGGCGTTGGATTGGCCGC
CGAGATCATCGGCACCTTTGTGTTGGTTTACACTGTCTTCTCGGCCACTG
ATCCCAAAAGAAGCGCCAGAGACTCCCATGTCCCCGTTTTGGCACCGCTC
CCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCTATCAC
TGGCACTGGCATTAACCCAGCAAGGAGTCTCGTGGCCGCTGTTATTTACA
ACCAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCTTC
A
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