CF832937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.443e-11 Identity = 53/174 (30.46%), Postives = 79/174 (45.40%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLG---AISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYT--VFSATDPKR----SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 +F A +SGGH+NPAVTF + ++ + A+ Y +Q LG A + L A ++ TR +A + G E + TF+LVYT V +P+ R+ L L +G LA +TG +NPARS AV+ K +Q ++W GP Sbjct: 69 LFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTR-------IAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGHFK---NQAVYWAGP 232
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.443e-11 Identity = 50/170 (29.41%), Postives = 78/170 (45.88%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG-----LAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 + V+ Y T ISG H+NPAVT R ++ Y AQ GA+ ++KA + G +T G LA EI+ TF +++ + R+ V LA L +G AV + + P++G +NPAR+L AV N + W++++GP Sbjct: 98 VTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPI----------AVIGTTTPSGPHWHALAIEIVVTFNMMFVTCAVATDSRA-----VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASN---VFTGLWIYFLGP 249
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.109e-11 Identity = 48/170 (28.24%), Postives = 82/170 (48.24%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVG----LVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 + V+ Y ISG H NPAVT + + + +Y++AQ +G+I G L ++Y+ G+N G LA EII +F+L++ + ATD D + +A + +G + + PI+G +NPARS+ A++ + + W++ VGP Sbjct: 85 VMVMVYTVGYISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYFGTVPVGSN--------GQSLAIEIIISFLLMFVISGVATD------DRAIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIVKH---VYTGLWVYVVGP 237
BLAST of CF832937 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.285e-11 Identity = 47/168 (27.98%), Postives = 75/168 (44.64%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTG---VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLVAAVIYNQDKAWDDQWLFWVGP 497 + V+ Y ISG H NPAVT + + + Y++AQ LGA G ++ +GG TG L EII TF L++ + R+ + LA L +G + + L P++G +NPARS+ A++ + + W++ VGP Sbjct: 87 VMVMVYAVGHISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLRLM-------FGGRHEHFPGTLPTGSEVQSLVIEIITTFYLMFVISGVATDNRA-----IGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGE---YTSIWVYVVGP 239 The following BLAST results are available for this feature:
BLAST of CF832937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832937 ID=CF832937; Name=CF832937; organism=Citrus sinensis; type=EST; length=501bpback to top |