CF832939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12 Identity = 50/145 (34.48%), Postives = 69/145 (47.59%), Query Frame = 3 Query: 36 SGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-----GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNK 455 SG H NPAVT + +SL RAV Y+ AQ GA G L+ Y GG G N + + STG +A E++ T LV VF++ D +++ + + +G HL I TG +NPA+S AVI K Sbjct: 74 SGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALL------YGVTPGGVRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGSPAAMIGTSVALG------HLIGIYFTGCSMNPARSFGPAVIVGK 206
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12 Identity = 49/145 (33.79%), Postives = 70/145 (48.28%), Query Frame = 3 Query: 36 SGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-----GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNK 455 SG H NPAVT + +SL RA+ Y+ AQ GA +G L+ Y GG G N + + STG +A E++ T LV VF++ D +++ + + +G HL I TG +NPA+S AVI K Sbjct: 74 SGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALL------YGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLASPAAMIGTSVALG------HLIGIYFTGCSMNPARSFGPAVIVGK 206
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12 Identity = 48/149 (32.21%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 12 LFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-----TVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAV 443 + + +GISG +NPAVT G ++ ++ + +++ QC+GA+ G G++KA ++Y R A LA G + G E++ T LV+ V++ DPK S +APL IG A TG +NPA+S AV Sbjct: 80 IIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYER-DLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPKISR-------VAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPAV 220
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 7.674e-12 Identity = 52/167 (31.14%), Postives = 83/167 (49.70%), Query Frame = 3 Query: 3 IFVLFYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGA---NELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 + V TAG +SGGH+NPAVT L + ++L R+ +Y+ AQ G+ L++ GG A + LADG G+AAE + TF L+ + + DP+R++ P+L L +G +A +TG +NPA+S A+ + W W++ Sbjct: 69 LVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLT-------GGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANT----VAGGALTGASMNPARSFGPALATGE---WAHHWVY 221
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.309e-11 Identity = 51/157 (32.48%), Postives = 77/157 (49.04%), Query Frame = 3 Query: 24 TAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 TAG +SGGH+NPAVT GL + ++ +RAV+Y+ AQ L + + L++ T + L G S GL E+I TF L++ ++ DP+ S V + PL G LA TG +NPA+S A+ W + W++ Sbjct: 78 TAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVT----PVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGD---WTNHWVY 222
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.309e-11 Identity = 49/153 (32.03%), Postives = 75/153 (49.02%), Query Frame = 3 Query: 33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAF--QKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 ISGGH NPAV+ L ++LV + Y V+Q LG + G L KA ++ ++ G + + L AEII T +L V +++ LAP IGFA + LA P++G +NPA++ AV+ N W+ W++ Sbjct: 86 ISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTKGP-----LAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANH---WNFHWIY 230
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.710e-11 Identity = 45/158 (28.48%), Postives = 77/158 (48.73%), Query Frame = 3 Query: 12 LFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 L + +G+SG ++NPAVT L+ +V L+ ++ Y+ AQ LG I+G G++ + Y R G LA G +TG E++ T +L V + + D + +AP IG A ++ +G +NP + L ++I W W++ Sbjct: 83 LIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCLPNMY-RIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTS--VFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLGPSIISG---VWSHHWVY 234
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11 Identity = 49/156 (31.41%), Postives = 73/156 (46.79%), Query Frame = 3 Query: 33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANEL-----ADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 +SGGHINPAVT GL ++L R+ +Y AQ LG+ L+ A GG + A G +A E + TF L++ V++ +R + V L PL +G LA P +G +NPA+S A+ + W D W++ Sbjct: 76 VSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALT--------GGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRA----VGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGE---WADHWIY 216
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: NO26_SOYBN (Nodulin-26 OS=Glycine max PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 6.496e-11 Identity = 47/162 (29.01%), Postives = 75/162 (46.30%), Query Frame = 3 Query: 9 VLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA---EIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 VL Y ISGGH NPAVT R+ L++ Y+VAQ LG+I G ++ + G ++ + G L A E I TF L++ + R+ V A + IG + + P+TG +NPA+SL A ++ + ++ W++ Sbjct: 83 VLVYTVGHISGGHFNPAVTIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLL-------FMGNHDQFSGTVPNGTNLQAFVFEFIMTFFLMFVICGVATDNRA-----VGEFAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGE---YEGIWIY 229
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 49/164 (29.88%), Postives = 79/164 (48.17%), Query Frame = 3 Query: 3 IFVLFYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 + V TAG ISGGH+NPAVT L + V+L R+ +Y+ AQ L + + L++ T + LA+G G+ AE + TF L++ +++ DP++ +P PL G +A ++G +NPA+S AV W W++ Sbjct: 64 LVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLAT----PVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL-----LPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASG---VWTHHWVY 215 The following BLAST results are available for this feature:
BLAST of CF832939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832939 ID=CF832939; Name=CF832939; organism=Citrus sinensis; type=EST; length=486bpback to top |