CF832939

Overview
NameCF832939
Unique NameCF832939
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17
Identity = 57/148 (38.51%), Postives = 80/148 (54.05%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAV 443
            +FV     A +SGGH+NPAVT GL +   ++++  + Y +AQCLG+     L+K           G    +A G     G+  EII TF LVYTV+ +A DPK+ S    + V+AP+ IGF      LA  P +G  +NPA+S   AV
Sbjct:   67 LFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHG----VAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 206          
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17
Identity = 59/153 (38.56%), Postives = 82/153 (53.59%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGV----GLAAEIIGTFVLVYTVF-SATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVI 446
            +FV     A ISGGH+NPAVT GL +   ++L+    Y +AQCLG+I     V      + T    G +    G S G+    G+  EI+ TF LVYTV+ +A DPK+ S    +  +AP+ IGF      LA  P +G  +NPA+S   AV+
Sbjct:   67 LFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSI-----VACLLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 207          
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17
Identity = 56/142 (39.44%), Postives = 75/142 (52.82%), Query Frame = 3
Query:   18 YCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAV 443
            +C AG+SGG +NPAV+  L LAR VS  R V+  V+Q +  ++  G   A            AN L  G S   GL  E+ GT +L  TV      KR +       +A LPIG + ++ H+A    TGTG+NPA+SL AAV
Sbjct:  107 WCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVL----FANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAV 239          
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17
Identity = 61/168 (36.31%), Postives = 86/168 (51.19%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPV-LAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485
            +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T   +  +  +T        S  P   AP+ IGF   ++HL +IP+T T +NPA+S   A+  ++  A    WLF
Sbjct:   47 VLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGST-------SSLAPAGFAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR-AALSQLWLF 206          
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17
Identity = 61/168 (36.31%), Postives = 86/168 (51.19%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPV-LAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485
            +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T   +  +  +T        S  P   AP+ IGF   ++HL +IP+T T +NPA+S   A+  ++  A    WLF
Sbjct:   47 VLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGST-------SSLAPAGFAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR-AALSQLWLF 206          
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17
Identity = 55/151 (36.42%), Postives = 78/151 (51.66%), Query Frame = 3
Query:   33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485
            +SG HINPAVT    +   VS +RAV Y+ AQ LGA++G  L+         R     N L +  + G  +  E+  T  LV  +F +TD +R  +  H      L IGF+  + HL  I  TG  +NPA+SL  A++  K   +DD W+F
Sbjct:   62 VSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPP-AIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVF 204          
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.556e-17
Identity = 57/144 (39.58%), Postives = 75/144 (52.08%), Query Frame = 3
Query:   18 YCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQ--KSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAV 443
            +C AG+SGG +NPAV+  L LAR +S  R V+    Q +  ++  G   A    K  +T      N L  G S   GL  E+ GT VL  TV      KR +       +A LPIG + +M H+A    TGTG+NPA+SL AAV
Sbjct:  106 WCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTPGKVLFT------NALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAV 238          
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.556e-17
Identity = 51/168 (30.36%), Postives = 84/168 (50.00%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV-------KAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485
            +  + +    ISG H+NPAV+FGL +  +      + Y++AQ +GAI   G++         F+ S      G A+    GY+ G G  +E++ T + +  +  ATD +  +        AP+ IG A  ++HL +IP+T T +NPA+S   A ++    A    WLF
Sbjct:   48 VLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALQQLWLF 208          
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.645e-17
Identity = 61/168 (36.31%), Postives = 85/168 (50.60%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPV-LAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485
            +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T   +  +  +T        S  P   AP+ IGF   ++HL +IP+T T +NPA+S   A ++    A    WLF
Sbjct:   47 VLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGST-------SSLAPAGFAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVA-LFADTAALSQLWLF 206          
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.645e-17
Identity = 56/169 (33.14%), Postives = 82/169 (48.52%), Query Frame = 3
Query:    3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKA-------FQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPV-LAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485
            +  + Y   GISGGH NPAV+ GL +A +V     V Y++AQ  GAI    ++         FQ   +   G G +    GYS    L  E++ TF  +  +  +T  +       VP   AP+ IG A  ++HL +IP+T T +NPA+S   A ++    A    WLF
Sbjct:   47 VLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHS-PGGYSLTAALVTEVVMTFFFLIIILGSTHRR-------VPAGFAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQA-LFVGGWALSQLWLF 206          
The following BLAST results are available for this feature:
BLAST of CF832939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
TIP_ANTMA2.085e-1738.51Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP23_ARATH2.085e-1738.56Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
AQY1_YEAST2.085e-1739.44Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQPZ_BRUAB2.085e-1736.31Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA22.085e-1736.31Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
AQP2_SHEEP2.085e-1736.42Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQY2_YEAST3.556e-1739.58Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQPZ_PSEPK3.556e-1730.36Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
AQPZ_BRUME4.645e-1736.31Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQPZ2_RHIME4.645e-1733.14Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832939 ID=CF832939; Name=CF832939; organism=Citrus sinensis; type=EST; length=486bp
TGATCTTTGTCCTCTTTTACTGCACCGCCGGTATCTCAGGTGGTCACATT
AACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGT
CCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCAATCTCCGGCG
TTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGA
GGGGCCAACGAGCTGGCCGATGGGTACAGCACAGGCGTTGGATTGGCCGC
CGAGATCATCGGCACCTTTGTGTTGGTTTACACTGTCTTCTCGGCCACTG
ATCCCAAAAGAAGCTCCAGAGACTCCCATGTCCCCGTTTTGGCACCGCTC
CCCATTGGATTTGCTGAGTACATGGTACACTTGGCCACAATCCCAATCAC
TGGCACTGGCATTAACCCAGCAAAGAGTCTCCGGGCCGCTGTTATTTACA
ATAAGGACATGGCTTGGGATGATCCATGGCTCTTCT
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