CF832950

Overview
NameCF832950
Unique NameCF832950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_STRGG (Phosphoglycerate kinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=pgk PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30
Identity = 73/146 (50.00%), Postives = 91/146 (62.33%), Query Frame = 1
Query:    4 KGASLLLPTDVVIADKFA-----ADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALDD 423
            KG   +LP DVV+A  F      A A+   V A A+P G MGLD GP+  K ++  L    T+ WNGPMGVFE   FA GT A+A+ L + S     +++GGGDS AAV  +G  +    HISTGGGASLE LEGKTLPG+ AL+D
Sbjct:  261 KGVEFVLPVDVVVAPSFPDLKTKAPAHPTTVAADAMPAGQMGLDNGPETNKLYASKLADAATVFWNGPMGVFEHPDFADGTRAVAQALVDSS---AFSVVGGGDSAAAVRILGFDENAFGHISTGGGASLEYLEGKTLPGLAALED 403          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_RHOCS (Phosphoglycerate kinase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=pgk PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30
Identity = 69/140 (49.29%), Postives = 91/140 (65.00%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 417
            + G  +LLP D  +A +F A A  +VVP   I D  M LDVGP  ++     L   KT++WNGPMG FE   F +GT A+A  +A L+G G V ++ GGGD+VAA+E+ G+A + S++ST GGA LE LEGK LPGV AL
Sbjct:  255 ASGCEILLPQDGAMAKEFKAGAPHRVVPVEQIADDEMMLDVGPATVEFVGLKLQGAKTVVWNGPMGAFEIRPFDSGTNAVAGLVAALTGDGRVLSVAGGGDTVAALEQAGVAGRFSYVSTAGGAFLEWLEGKELPGVKAL 394          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_RALSO (Phosphoglycerate kinase OS=Ralstonia solanacearum GN=pgk PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30
Identity = 67/140 (47.86%), Postives = 95/140 (67.86%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            ++GAS+ +P DVV A +F+A A + V     + D  M LD+GP      ++ L  + TI+WNGP+GVFEFD+F  GT+ +A+ +A  SG    +I GGGD++AA+ K G+AD++ +ISTGGGA LE LEGKTLP V  L+
Sbjct:  273 ARGASVPIPVDVVCAKEFSATAAATVKDVKDVADDDMILDIGPKTAAQLADQLKASGTIVWNGPVGVFEFDQFGNGTKVLAEAIAASSG---FSIAGGGDTLAAIAKYGIADRVGYISTGGGAFLEFLEGKTLPAVEILE 409          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_PSEPF (Phosphoglycerate kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30
Identity = 69/138 (50.00%), Postives = 98/138 (71.01%), Query Frame = 1
Query:   13 SLLLPTDVVIADKFA--ADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            S+ LP DVV+A +FA  A+A  K++   A  D  M LD+GP    +F+E L ++KTI+WNGP+GVFEFD+F  GT+ +A+ +AE       +I GGGD++AA++K G+A+K+S+ISTGGGA LE +EGK LP V  L+
Sbjct:  250 SVPLPVDVVVAKEFAESAEATVKLIADVAADD--MILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQFGNGTKVLAEAIAE---SAAFSIAGGGDTLAAIDKYGVAEKISYISTGGGAFLEFVEGKVLPAVEVLE 382          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_PSEMY (Phosphoglycerate kinase OS=Pseudomonas mendocina (strain ymp) GN=pgk PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30
Identity = 66/136 (48.53%), Postives = 94/136 (69.12%), Query Frame = 1
Query:   13 SLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            S+ LP DVV+A  FA DA + V     + D  M LD+GP   + F+E L  ++TI+WNGP+GVFEFD+F  GT+A+A  +AE       +I GGGD++AA++K G+++++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  250 SVPLPVDVVVAKAFAEDAEATVKSVKDVADDDMILDIGPQTAQQFAEMLKASQTILWNGPVGVFEFDQFGNGTKALALAIAE---SPAFSIAGGGDTLAAIDKYGVSEQISYISTGGGAFLEFVEGKVLPAVEVLE 382          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_PSEAE (Phosphoglycerate kinase OS=Pseudomonas aeruginosa GN=pgk PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30
Identity = 65/133 (48.87%), Postives = 90/133 (67.67%), Query Frame = 1
Query:   22 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  253 LPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_PSEAB (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pgk PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30
Identity = 65/133 (48.87%), Postives = 90/133 (67.67%), Query Frame = 1
Query:   22 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  253 LPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_PSEA8 (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=pgk PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30
Identity = 65/133 (48.87%), Postives = 90/133 (67.67%), Query Frame = 1
Query:   22 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  253 LPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_ANAD2 (Phosphoglycerate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pgk PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.642e-30
Identity = 66/141 (46.81%), Postives = 88/141 (62.41%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            ++   LLLP D V   +    A   VV   AIPDG MGLD+GP  +  + + +   KT+ WNGPMG+FE   ++ GT  +AK +A        T++GGGDS AAVE+ GL D M H+STGGGASLE +EG+ LPGV A ++
Sbjct:  259 ARKVDLLLPVDHVCGAEPKETAERVVVNDRAIPDGLMGLDIGPKTLDRYRQRIAAAKTVFWNGPMGLFEQKPWSEGTFGVAKAMA---ASPAVTVVGGGDSAAAVEQAGLVDAMKHVSTGGGASLEFIEGRELPGVKACEE 396          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_THISH (Phosphoglycerate kinase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.757e-30
Identity = 70/143 (48.95%), Postives = 98/143 (68.53%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAAD--ANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            +KG  + +PTDVV   +F+    A++K V   A  D  M  DVGPD   S+++ L    TI+WNGP+GVFEFD+FAAGT+A+ + +A+  G    +I GGGD++AA++K GLA ++S+ISTGGGA LE LEGK LP V  L++
Sbjct:  251 AKGGDIPVPTDVVTGKEFSESTPASTKRVSEVAADD--MIFDVGPDTAASYADMLRKAGTIVWNGPVGVFEFDQFAAGTKALGEAIADSDG---FSIAGGGDTLAAIDKYGLASRISYISTGGGAFLEFLEGKKLPAVAMLEE 388          
The following BLAST results are available for this feature:
BLAST of CF832950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_STRGG3.642e-3050.00Phosphoglycerate kinase OS=Streptomyces griseus su... [more]
PGK_RHOCS3.642e-3049.29Phosphoglycerate kinase OS=Rhodospirillum centenum... [more]
PGK_RALSO3.642e-3047.86Phosphoglycerate kinase OS=Ralstonia solanacearum ... [more]
PGK_PSEPF3.642e-3050.00Phosphoglycerate kinase OS=Pseudomonas fluorescens... [more]
PGK_PSEMY3.642e-3048.53Phosphoglycerate kinase OS=Pseudomonas mendocina (... [more]
PGK_PSEAE3.642e-3048.87Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEAB3.642e-3048.87Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEA83.642e-3048.87Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_ANAD23.642e-3046.81Phosphoglycerate kinase OS=Anaeromyxobacter dehalo... [more]
PGK_THISH4.757e-3048.95Phosphoglycerate kinase OS=Thioalkalivibrio sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832950 ID=CF832950; Name=CF832950; organism=Citrus sinensis; type=EST; length=606bp
TCTAAAGGGGCGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAA
GTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAG
ATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATCAAGTCATTCAGT
GAAGCTTTGGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGT
GTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGC
TTGCGGAGCTCAGCGGGAAGGGAGTGACCACAATCATTGGAGGAGGTGAC
TCAGTTGCAGCCGTAGAGAAGGTTGGTCTGGCTGACAAGATGAGCCATAT
CTCCACTGGAGGTGGAGCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCC
CTGGTGTGCTTGCTCTTGATGATGCTTAAACCCAGTTCCTGGACTTTCCT
TTTTTAAATGTGCCATTTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCC
AGAGTGGATAAAAGTTAAACTTTATCATTAGAGTTGGTTTTGTAGATGCT
GTAAGAGTAAAAATAAATTCTTTCTCACAGGCATCAATGGTGATGCATTT
TTCTGG
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